DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nop5 and nop58

DIOPT Version :10

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_989298.1 Gene:nop58 / 394916 XenbaseID:XB-GENE-990556 Length:533 Species:Xenopus tropicalis


Alignment Length:526 Identity:349/526 - (66%)
Similarity:413/526 - (78%) Gaps:18/526 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAATAAVE 65
            |.||:||.|||||||:|||.||::||::::|||||||||:::||||||||.||||||||:||.||
 Frog     1 MLVLFETAAGYAIFKVLDESKLQEVDSIWKEFETPEKANRVVKLKHFEKFQDTTEALAASTALVE 65

  Fly    66 GKVAKPLKKTLKKLLVDDVQSSLLVADAKLGTAIKDKLSVQCVCNTGVQELMRCIRQQADSLLGG 130
            ||::|.|||.|:|:...:....|.:||||||..||||.::.||.::.|.||||.||.|.|.|:.|
 Frog    66 GKLSKNLKKVLRKIAAKEAHEQLAIADAKLGGVIKDKANISCVHSSMVTELMRGIRNQIDGLITG 130

  Fly   131 LPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPEL 195
            :..|||.||:||||||||||||||||||:|||||||..||||||||||||:||.|||||||||||
 Frog   131 ISSREMAAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPEL 195

  Fly   196 GKIITDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEEDVLNIQCLCD 260
            |||||||:|:.|.::.||.|.|.||.|||:||||:||.:||.|||||||||:||||:.||..|||
 Frog   196 GKIITDNLAYCKCLRAVGDRINFATFDLSEILPEEVETEVKAAAEISMGTEVSEEDINNILHLCD 260

  Fly   261 EIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSSTVQILGAEKA 325
            ::|.|::||:.||||||.||||:|||||||||:.||||||||||||:||||||:|||||||||||
 Frog   261 QVIEISEYRSQLYDYLKNRMMAIAPNLTVLVGELVGARLIAHAGSLLNLAKHPASTVQILGAEKA 325

  Fly   326 LFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKV 390
            |||||||:||||||||||||.||||.:.|||||:||.|||||:||.|.||.||:...|||...:.
 Frog   326 LFRALKTRKDTPKYGLIYHASLVGQTTPKNKGKISRMLAAKAALAIRYDALGEDTNAELGVETRA 390

  Fly   391 KLESRLRLLEEGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTL-NVKKKRKHSESEQ---- 450
            |||||||.|||..|:::||||||.|:.||||.||||.||.|..|:|| :|.||||..|.|:    
 Frog   391 KLESRLRHLEEKGLKRISGTGKALARAEKYQHKSEVRTYDPSGDSTLPSVPKKRKFEEVEEEEQP 455

  Fly   451 -QTPVKKEEP------AEEEAEVKSEKKKKKKKKQK--DEEVEAVE-EAAAPEPEDQ---PTPAK 502
             :|.||.::|      .|||.|.::.||||||||.|  :||.|||| |....||...   .||.|
 Frog   456 AETKVKSKKPKVEVVQEEEEIEEEAPKKKKKKKKIKVEEEEAEAVEVEVEEEEPSTSTAVETPKK 520

  Fly   503 KKKKSK 508
            ||||.|
 Frog   521 KKKKKK 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:462382 35/49 (71%)
Nop 170..397 CDD:460335 170/226 (75%)
nop58NP_989298.1 NOP5NT 2..66 CDD:462382 46/63 (73%)
Nop 170..397 CDD:460335 170/226 (75%)

Return to query results.
Submit another query.