DRSC/TRiP Functional Genomics Resources

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Protein Alignment nop5 and nop56

DIOPT Version :10

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_595368.1 Gene:nop56 / 2541087 PomBaseID:SPBC646.10C Length:497 Species:Schizosaccharomyces pombe


Alignment Length:524 Identity:197/524 - (37%)
Similarity:306/524 - (58%) Gaps:49/524 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FVLYETPAGYAIFKLL--DE--KKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAATA 62
            ::|||:..||::|.::  |:  .|.::|....|:.   .|..|:::|:.|..|.:...||..|..
pombe     4 YLLYESATGYSLFDVVGADQIAAKTKEVQLSLQDI---SKFGKVVQLRSFIPFKNAAHALENAND 65

  Fly    63 AVEGKVAKPLK--------KTLKKLLVDDVQSSLLVADAKLGTAIKDKL-SVQCVCNTGVQELMR 118
            ..||.:...||        |..||..|     ||.|.|..|.|:||.:: :::|..:...|:|:|
pombe    66 ISEGVLNDFLKNFLELNLPKASKKKKV-----SLGVQDKNLATSIKSEIDAIECDTSELTQDLLR 125

  Fly   119 CIRQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMR 183
            .||...|.||..|...:.....|||.||.||.|:||:.::.|.||:||..:||.|||::|.:.||
pombe   126 GIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAILDQLDKDINTFAMR 190

  Fly   184 AREWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSDLSDIL-----PEDVEEKVKEAAEISM 243
            .:|||.||||||.||:.||..:...:.|||.:..:....|.|:.     .:|:.:.:..|.::||
pombe   191 MKEWYSWHFPELSKIVGDNYKYAVIVTLVGDKTTINDEMLHDLAAVVDDDKDIAQSIINAGKVSM 255

  Fly   244 GTEISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLIN 308
            |.:|||.|:.||....:.:|.:::||..|::||..:|..:||||..|:|:.||||||:|||||.|
pombe   256 GQDISEIDLENILSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAELIGEMVGARLISHAGSLTN 320

  Fly   309 LAKHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRV 373
            |:|.|:||||||||||||||||||:.:|||||:|||:..:|:|..||||::||.||.|.|:|:|:
pombe   321 LSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIGKAGAKNKGRISRFLANKCSIASRI 385

  Fly   374 DAFGEEATFELGAAHKVKLESRLRLLEEGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTLN 438
            |.|.:..|...|...:.::|.||...:.|    ::.|..:.|..|.|:          :|.:::|
pombe   386 DNFSDAPTTAFGQVLRRQVEERLNFFDTG----VAPTRNSIAMAEAYE----------KALSSVN 436

  Fly   439 VKKKRKHSESEQQTPVKKEEPAEEEAEVKSEKKKKKKKKQKDEEVEAVEEAAAPEPEDQPTPAKK 503
            :       :.:::..:..||..|..:|..|:|:||.||::|.|  ::.::.:|.:..::...:||
pombe   437 I-------DGDEEVDIDVEETVETISEKPSKKEKKDKKEKKKE--KSKKKRSADDASEEVKKSKK 492

  Fly   504 KKKS 507
            ||||
pombe   493 KKKS 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:462382 15/53 (28%)
Nop 170..397 CDD:460335 111/231 (48%)
nop56NP_595368.1 NOP5NT 4..69 CDD:462382 18/67 (27%)
Nop 177..409 CDD:460335 111/231 (48%)

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