Sequence 1: | NP_001260166.1 | Gene: | Rat1 / 33964 | FlyBaseID: | FBgn0031868 | Length: | 908 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593482.1 | Gene: | exo2 / 2542204 | PomBaseID: | SPAC17A5.14 | Length: | 1328 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 730 | Identity: | 285/730 - (39%) |
---|---|---|---|
Similarity: | 388/730 - (53%) | Gaps: | 148/730 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGIIHPCTH 65
Fly 66 PED--KPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETTE 128
Fly 129 KRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQNNNPAWKGI 193
Fly 194 KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIREEFL 258
Fly 259 PNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAEVKFIFVRLSVLREYLKQTLE--M 321
Fly 322 PNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGDV 386
Fly 387 NLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQERNQDHGSLNQSAFGASAVGPNSQQ 451
Fly 452 RSVGNYKEEAAALRN-----------------------RKRTSDM-------------------- 473
Fly 474 --ANLDDEDEEE------------------NNDEVRLWEDG-------FKDRYYESKFDVAPGNQ 511
Fly 512 QFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFNPLEQ 576
Fly 577 LMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKAL 641
Fly 642 VPYYDQLTGEEVKRN 656 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rat1 | NP_001260166.1 | XRN1 | 1..735 | CDD:227382 | 285/730 (39%) |
XRN_N | 1..255 | CDD:281193 | 131/255 (51%) | ||
exo2 | NP_593482.1 | XRN1 | 1..932 | CDD:227382 | 285/730 (39%) |
XRN_N | 1..225 | CDD:281193 | 131/255 (51%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5049 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100417 | |
Panther | 1 | 1.100 | - | - | O | PTHR12341 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |