Sequence 1: | NP_001260166.1 | Gene: | Rat1 / 33964 | FlyBaseID: | FBgn0031868 | Length: | 908 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036047.2 | Gene: | Xrn2 / 24128 | MGIID: | 894687 | Length: | 951 | Species: | Mus musculus |
Alignment Length: | 963 | Identity: | 502/963 - (52%) |
---|---|---|---|
Similarity: | 608/963 - (63%) | Gaps: | 115/963 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGIIHPCTH 65
Fly 66 PEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKETTEKR 130
Fly 131 LEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFVHDRQNNNPAWKGIKV 195
Fly 196 ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIREEFLPN 260
Fly 261 KPRPCDICNGFGHEMDKCVGLGATAPTSANFKPD-----VPIGAEVKFIFVRLSVLREYLKQTLE 320
Fly 321 MPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVELYKKCVYKTRGYLTDSGD 385
Fly 386 VNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDK-ARKRQERNQ----------DH--GSLN- 436
Fly 437 ----------QSAF-------GASAVGPNSQQRSVGNYKEEAAALRNRKRTSDMANLDDEDEEEN 484
Fly 485 NDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHYAP 549
Fly 550 FASDFVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPEPWAKLMSDPESPIIDFYPEDFKI 614
Fly 615 DLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEEVKRNKRGDNYLYISNQSPHYKKVKKI- 678
Fly 679 ----SEKDD--ESVCKAISFDGMRGTLGKTELNTAISGVLKSPISGLSDINDNITVTTTFRDPEY 737
Fly 738 DEDYIFEAKRLENAVDPPQVL-PNE----QSGNKHRPVIGFNSHLTRAYVPDSGHRMLNAGIRNQ 797
Fly 798 QGGGGNGGGGGGYGQGGGYGQGIGGNQGQSYQNNS---RNYNYNYNNNYNQHQGGGYQ---NNYN 856
Fly 857 NRQQQQY-GHNQRFNQDNSNQQQRNFNNYNG-----PRNNNYQQQGGSRQQNQ 903 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rat1 | NP_001260166.1 | XRN1 | 1..735 | CDD:227382 | 454/776 (59%) |
XRN_N | 1..255 | CDD:281193 | 193/253 (76%) | ||
Xrn2 | NP_036047.2 | XRN1 | 1..787 | CDD:227382 | 467/805 (58%) |
XRN_N | 1..253 | CDD:281193 | 193/253 (76%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 408..508 | 25/107 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 907..951 | 2/2 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167842452 | |
Domainoid | 1 | 1.000 | 426 | 1.000 | Domainoid score | I606 |
eggNOG | 1 | 0.900 | - | - | E1_COG5049 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6927 | |
Inparanoid | 1 | 1.050 | 899 | 1.000 | Inparanoid score | I381 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1160 |
OMA | 1 | 1.010 | - | - | QHG54717 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003161 | |
OrthoInspector | 1 | 1.000 | - | - | oto93596 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100417 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12341 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1677 |
SonicParanoid | 1 | 1.000 | - | - | X2128 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.740 |