DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nlg2 and Tg

DIOPT Version :9

Sequence 1:NP_001245916.1 Gene:Nlg2 / 33962 FlyBaseID:FBgn0031866 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_112250.2 Gene:Tg / 24826 RGDID:3848 Length:2768 Species:Rattus norvegicus


Alignment Length:647 Identity:172/647 - (26%)
Similarity:266/647 - (41%) Gaps:164/647 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 LHGGSNTVKTKYGLLRGIVVRSSPLVEAFLGIPYASPPVGSLRFMPPITPSTWKTVRSADRFSPV 242
            |.|||..||         |..:...|..|||:|||:||:...||..| ....|.....|.:....
  Rat  2210 LQGGSQVVK---------VGTAWKQVYQFLGVPYAAPPLAENRFQAP-EVLNWTGSWDATKLRSS 2264

  Fly   243 CPQ---NIPIPPNGPEALLEVPRARLAQLRRLLPLLKNQSEDCLYLNIYVPYETRRQRRNTDDTT 304
            |.|   ..|.||               |:          ||||||||::||...           
  Rat  2265 CWQPGTRTPTPP---------------QI----------SEDCLYLNVFVPENL----------- 2293

  Fly   305 GEPKTKLSTVVFIHGESYDWNSGNP--YDGSELAAHGNVIVVTINFRLGIFGFLKTGGKESAQGN 367
               .:..|.:||.|.......||..  .|||.|||.||:||||.|:|||:||||.:|..|.| ||
  Rat  2294 ---VSNASVLVFFHNTVEMEGSGGQLNIDGSILAAVGNLIVVTANYRLGVFGFLSSGSDEVA-GN 2354

  Fly   368 FGLMDLVAGLHWLKENLPAFGGDPQSITLLGYGTGAVLANI--LVVSPVASDLIQRTVLVSGSAL 430
            :||:|.||.|.|::.::.|||||||.:||.....||.:|:|  |:..|....|.::.:|:.||||
  Rat  2355 WGLLDQVAALTWVQTHIGAFGGDPQRVTLAADRGGADVASIHLLITRPTRLQLFRKALLMGGSAL 2419

  Fly   431 SPWAIQKNPLFVKRR---VAEQTGCHGDMLYDDLAPCLRTK-----SVAELLAVKVDHPRFLVGF 487
            ||.|| .:|...:::   :|::.||....: .::..|.|.|     :.|:...:.|..|....| 
  Rat  2420 SPAAI-ISPDRAQQQAAALAKEVGCPNSSV-QEVVSCFRQKPANILNEAQTKLLAVSGPFHYWG- 2481

  Fly   488 APFVDGTVISPGANPLGSTTLPLGSAIVSTSGIEYANFPKRDLIFCLTSVESYLDLSAQDLEFGF 552
             |.|||..:....:......||:                |.||:...:..:..::.:....:|..
  Rat  2482 -PVVDGQYLRELPSRRLKRPLPV----------------KVDLLIGGSQDDGLINRAKAVKQFEE 2529

  Fly   553 NETRRD--------------------RILRTFVRNNFHYHLNEIFAVLKNEYTDWEKAIRNPLSS 597
            ::.|.:                    |||...:   ::|.|..    ..::|..:.:|:.|  ::
  Rat  2530 SQGRTNSKTAFYQALQNSLGGEDSDARILAAAI---WYYSLEH----STDDYASFSRALEN--AT 2585

  Fly   598 RDATLQFLSDGHTASPLIKLGYMHSLR-GGRAYFLHFKHKTIEEEYPQRSGSVRGEDVPFWLGLP 661
            ||..:        ..|::.:..:.:.| .|..:..|     :.|.|...|..:.. ||.:..|||
  Rat  2586 RDYFI--------ICPIVNMASLWARRTRGNVFMYH-----VPESYGHGSLELLA-DVQYAFGLP 2636

  Fly   662 MSPLFPHNYTTQERQIGRLMLRYLSNFAKTGNPN------QSTAKSVLPNPNEVLETALHQQKKR 720
            ....:...::.:|:.:...:::|.|||.::||||      |..|:...|.|:.|........|:.
  Rat  2637 FYSAYQGYFSMEEQSLSLKVMQYFSNFIRSGNPNYPHEFSQKAAEFATPWPDFVPGAGGESYKEL 2701

  Fly   721 STSLTHPNLSEALNLAVLYNQRRSNAMHEKRSYIRRRLRSNDAAFTQLGISSERDV-GSYDG 781
            |..|  ||                          |:.|:..|.:|....|.:.:|. |:.||
  Rat  2702 SAQL--PN--------------------------RQGLKKADCSFWSKYIQTLKDADGAKDG 2735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nlg2NP_001245916.1 COesterase 182..712 CDD:278561 155/571 (27%)
TgNP_112250.2 TY 34..93 CDD:238114
TY 96..161 CDD:238114
TY 164..249 CDD:294100
TY 301..359 CDD:238114
TY <613..658 CDD:238114
TY 661..724 CDD:238114
TY 730..>776 CDD:294100
TY <893..922 CDD:238114
TY 1005..1074 CDD:238114
TY 1150..1211 CDD:238114
Type II. /evidence=ECO:0000250|UniProtKB:P01266 1455..1468
GCC2_GCC3 1464..1509 CDD:285001
Type II. /evidence=ECO:0000250|UniProtKB:P01266 1469..1485
Type II. /evidence=ECO:0000250|UniProtKB:P01266 1486..1502
TY 1519..1566 CDD:214561
Type IIIA. /evidence=ECO:0000250|UniProtKB:P01266 1602..1722
Type IIIB. /evidence=ECO:0000250|UniProtKB:P01266 1723..1891
Type IIIA. /evidence=ECO:0000250|UniProtKB:P01266 1892..1994
Type IIIB. /evidence=ECO:0000250|UniProtKB:P01266 1995..2127
Type IIIA. /evidence=ECO:0000250|UniProtKB:P01266 2128..2185
Cholinesterase-like (ChEL). /evidence=ECO:0000250|UniProtKB:O08710 2188..2768 172/647 (27%)
COesterase 2198..2719 CDD:278561 166/629 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2731..2768 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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