DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens-2 and Gfi1

DIOPT Version :9

Sequence 1:NP_001285692.1 Gene:sens-2 / 33957 FlyBaseID:FBgn0051632 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_036698.1 Gene:Gfi1 / 24388 RGDID:2680 Length:423 Species:Rattus norvegicus


Alignment Length:513 Identity:208/513 - (40%)
Similarity:251/513 - (48%) Gaps:130/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 SMLSKNQQMHQQHHQQS-------HLAQRPKP-----AFISASEKLRRQSRSRSRSRSRSPCSSQ 245
            |.|.|:::.|..|..:|       .|...|.|     ..:||.|       |:...|.|....||
  Rat     4 SFLVKSKKAHSYHQPRSPGPDYSLRLETVPVPGRADGGAVSAGE-------SKMEPRERLSPESQ 61

  Fly   246 IDMEDADSNHSHRSLHSRSRSRSRSRSHSRSRSHSSSSSVELEVDSPPGS----PRISSPSGASA 306
            :                         :.:..|:.:|.:|.|..|..|...    .|..|||.:.|
  Rat    62 L-------------------------TEAPDRASASPNSCEGSVCDPSSEFEDYWRPPSPSVSPA 101

  Fly   307 SASELLITANGGGRSIGSKKSDLFSVSALLRRDEPPPQRRTPRSPPLGHLTSSGLAMPFNPLEAM 371
            |...|.       ||:                ||..|.     :.|......||||  .:.|..:
  Rat   102 SEKSLC-------RSL----------------DEAQPY-----TLPFKPYAWSGLA--GSDLRHL 136

  Fly   372 RQGYPPNYDAAMFQRPLFSPALPFFAAVAFHQGQQQQQQQQQQQSGLAAGYHPDSQENLFRLRSL 436
            .|.|   ...:..:|   |..|..|.......|:...:...:|.:| .||               
  Rat   137 VQSY---RQCSALER---SAGLSLFCERGAESGRPAARYGSEQAAG-GAG--------------- 179

  Fly   437 MVPLQSAGQNNSSAAAAAAAAAAAAVGVGVGVGVGVPPNGGHLGLP-------HSPHLHHFHHMA 494
                  |||..|..||:.|.:|.   |:|: .|...|...|....|       :....|..|  |
  Rat   180 ------AGQPGSCGAASGATSAG---GLGL-YGDFAPAAAGLFERPSTAAGRLYQDRGHELH--A 232

  Fly   495 AKWPGLHQFSDL-----------YSCMKCEKMFSTPHGLEVHSRRTHHGKKPYACELCNKTFGHE 548
            .|..|:...|:|           |.|:||.|:||||||||||.||:|.|.:|:|||:|.|||||.
  Rat   233 DKSVGVKVESELLCTRLLLGGGSYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGHA 297

  Fly   549 VSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSDTRPYPCNYCGKRFHQKSDMKKHTYI 613
            |||.||:|||:.|:.|:||.|||.||||||||||||||||||||||.||||||||||||||||:|
  Rat   298 VSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 362

  Fly   614 HTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHKAFQRKVDLRRHKETQH 671
            |||||||||||||||||||||||||||||||:|||.|.||.|.||||||||||:||||
  Rat   363 HTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQH 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sens-2NP_001285692.1 COG5048 <504..672 CDD:227381 137/179 (77%)
C2H2 Zn finger 509..530 CDD:275368 16/20 (80%)
zf-H2C2_2 522..545 CDD:290200 14/22 (64%)
C2H2 Zn finger 538..558 CDD:275368 14/19 (74%)
zf-H2C2_2 550..575 CDD:290200 15/24 (63%)
C2H2 Zn finger 566..586 CDD:275368 17/19 (89%)
zf-H2C2_2 579..603 CDD:290200 22/23 (96%)
C2H2 Zn finger 594..614 CDD:275368 17/19 (89%)
zf-H2C2_2 606..631 CDD:290200 23/24 (96%)
C2H2 Zn finger 622..642 CDD:275368 19/19 (100%)
zf-H2C2_2 634..657 CDD:290200 18/22 (82%)
C2H2 Zn finger 650..677 CDD:275368 18/22 (82%)
Gfi1NP_036698.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..102 27/129 (21%)
SNAG domain. /evidence=ECO:0000250 1..20 5/15 (33%)
Required for interaction with RELA. /evidence=ECO:0000250 141..258 31/147 (21%)
COG5048 <255..417 CDD:227381 131/161 (81%)
C2H2 Zn finger 258..279 CDD:275368 16/20 (80%)
C2H2 Zn finger 287..307 CDD:275368 14/19 (74%)
zf-H2C2_2 299..324 CDD:290200 15/24 (63%)
C2H2 Zn finger 315..335 CDD:275368 17/19 (89%)
C2H2 Zn finger 343..363 CDD:275368 17/19 (89%)
zf-H2C2_2 355..380 CDD:290200 23/24 (96%)
C2H2 Zn finger 371..391 CDD:275368 19/19 (100%)
C2H2 Zn finger 399..418 CDD:275368 14/18 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I10959
eggNOG 1 0.900 - - E33208_3BCNN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004101
OrthoInspector 1 1.000 - - otm45910
orthoMCL 1 0.900 - - OOG6_108076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2013
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.670

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