DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens-2 and pag-3

DIOPT Version :9

Sequence 1:NP_001285692.1 Gene:sens-2 / 33957 FlyBaseID:FBgn0051632 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_510480.1 Gene:pag-3 / 181588 WormBaseID:WBGene00003909 Length:336 Species:Caenorhabditis elegans


Alignment Length:189 Identity:116/189 - (61%)
Similarity:133/189 - (70%) Gaps:23/189 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 KPYACELCNKTFGHEVSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSDTRPYPCNYCG 598
            ||:.|:.|.|.|....:|.||:.||..:|.||||||||.||||||||||||||||||||||.|||
 Worm   124 KPFHCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCG 188

  Fly   599 KRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHKAFQRKVDL 663
            ||||||||||||||||||||||||.|||||||||||||||:|||||:|||:|.:|.:.||||||.
 Worm   189 KRFHQKSDMKKHTYIHTGEKPHKCTVCGKAFSQSSNLITHTRKHTGFKPFACDVCGRTFQRKVDR 253

  Fly   664 RRHKETQHTDLRVHLGKVDFMSAAAAAAASAELSAAAAAAAAAGGSVPGG--GPPGSQG 720
            |||:|:.|.      |..:  ...:|:..|::||             |.|  .||.|.|
 Worm   254 RRHRESHHP------GHPE--ECVSASQISSDLS-------------PKGYMTPPTSNG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sens-2NP_001285692.1 COG5048 <504..672 CDD:227381 104/137 (76%)
C2H2 Zn finger 509..530 CDD:275368
zf-H2C2_2 522..545 CDD:290200 5/10 (50%)
C2H2 Zn finger 538..558 CDD:275368 7/19 (37%)
zf-H2C2_2 550..575 CDD:290200 15/24 (63%)
C2H2 Zn finger 566..586 CDD:275368 18/19 (95%)
zf-H2C2_2 579..603 CDD:290200 22/23 (96%)
C2H2 Zn finger 594..614 CDD:275368 18/19 (95%)
zf-H2C2_2 606..631 CDD:290200 23/24 (96%)
C2H2 Zn finger 622..642 CDD:275368 17/19 (89%)
zf-H2C2_2 634..657 CDD:290200 15/22 (68%)
C2H2 Zn finger 650..677 CDD:275368 13/26 (50%)
pag-3NP_510480.1 C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
zf-H2C2_2 140..165 CDD:290200 15/24 (63%)
zf-C2H2 154..176 CDD:278523 20/21 (95%)
C2H2 Zn finger 156..176 CDD:275368 18/19 (95%)
COG5048 164..>233 CDD:227381 65/68 (96%)
zf-H2C2_2 169..193 CDD:290200 22/23 (96%)
C2H2 Zn finger 184..204 CDD:275368 18/19 (95%)
zf-H2C2_2 196..221 CDD:290200 23/24 (96%)
C2H2 Zn finger 212..232 CDD:275368 17/19 (89%)
zf-H2C2_2 224..247 CDD:290200 15/22 (68%)
C2H2 Zn finger 240..260 CDD:275368 12/19 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166268
Domainoid 1 1.000 50 1.000 Domainoid score I7817
eggNOG 1 0.900 - - E33208_3BCNN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto19142
orthoMCL 1 0.900 - - OOG6_108076
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3187
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.670

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