DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens-2 and Gfi1b

DIOPT Version :9

Sequence 1:NP_001285692.1 Gene:sens-2 / 33957 FlyBaseID:FBgn0051632 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001153878.1 Gene:Gfi1b / 14582 MGIID:1276578 Length:363 Species:Mus musculus


Alignment Length:207 Identity:136/207 - (65%)
Similarity:152/207 - (73%) Gaps:37/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 PGLHQFSDLYSCMKCEKMFSTPHGLEVHSRRTHHGKKPYACELCNKTFGHEVSLSQHRAVHN--- 559
            ||:    |.|.|:||.|:||||||||||.||:|.|.:|:||::|.|||||.|||.||..||:   
Mouse   158 PGM----DTYHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDVCGKTFGHAVSLEQHTHVHSQGV 218

  Fly   560 ------------------------------VEKVFECKQCGKRFKRSSTLSTHLLIHSDTRPYPC 594
                                          .|:.|||:.|||.||||||||||||||||||||||
Mouse   219 PAGSSPTPTLAVPGLEAPPAPDPPGPRFLRQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPC 283

  Fly   595 NYCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHKAFQR 659
            .:||||||||||||||||||||||||||||||||||||||||||||||||:|||||:||.|.|||
Mouse   284 QFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQR 348

  Fly   660 KVDLRRHKETQH 671
            |||||||:|:||
Mouse   349 KVDLRRHRESQH 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sens-2NP_001285692.1 COG5048 <504..672 CDD:227381 134/201 (67%)
C2H2 Zn finger 509..530 CDD:275368 16/20 (80%)
zf-H2C2_2 522..545 CDD:290200 13/22 (59%)
C2H2 Zn finger 538..558 CDD:275368 12/19 (63%)
zf-H2C2_2 550..575 CDD:290200 14/57 (25%)
C2H2 Zn finger 566..586 CDD:275368 16/19 (84%)
zf-H2C2_2 579..603 CDD:290200 21/23 (91%)
C2H2 Zn finger 594..614 CDD:275368 17/19 (89%)
zf-H2C2_2 606..631 CDD:290200 24/24 (100%)
C2H2 Zn finger 622..642 CDD:275368 19/19 (100%)
zf-H2C2_2 634..657 CDD:290200 19/22 (86%)
C2H2 Zn finger 650..677 CDD:275368 17/22 (77%)
Gfi1bNP_001153878.1 C2H2 Zn finger 165..186 CDD:275368 16/20 (80%)
C2H2 Zn finger 194..214 CDD:275368 12/19 (63%)
zf-C2H2 253..275 CDD:278523 18/21 (86%)
C2H2 Zn finger 255..275 CDD:275368 16/19 (84%)
COG5048 263..>340 CDD:227381 73/76 (96%)
C2H2 Zn finger 283..303 CDD:275368 17/19 (89%)
zf-H2C2_2 295..320 CDD:290200 24/24 (100%)
C2H2 Zn finger 311..331 CDD:275368 19/19 (100%)
C2H2 Zn finger 339..356 CDD:275368 13/16 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11204
eggNOG 1 0.900 - - E33208_3BCNN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2452
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004101
OrthoInspector 1 1.000 - - otm43826
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3187
SonicParanoid 1 1.000 - - X2013
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.750

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