DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens-2 and gfi1

DIOPT Version :9

Sequence 1:NP_001285692.1 Gene:sens-2 / 33957 FlyBaseID:FBgn0051632 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_002933849.1 Gene:gfi1 / 100491774 XenbaseID:XB-GENE-960553 Length:383 Species:Xenopus tropicalis


Alignment Length:458 Identity:188/458 - (41%)
Similarity:216/458 - (47%) Gaps:154/458 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 SPCSSQI-DMEDADSNHSHRSLHSRSRSRSRSRSHSRSRSHSSSSSVELEVDSPPGSPRISSPSG 303
            ||.||.: |..|..|:                ...||..|...:|..|.|....|.||.:|..|.
 Frog    51 SPVSSNLGDGTDVSSD----------------SPGSREGSVCETSPSECEDFWRPPSPSVSPASE 99

  Fly   304 ASASASELLITANGGGRSIGSKKSDLFSVSALLRRDEPPPQRRTPRSPPLGHLTSSGLAMPFNPL 368
            .||..|                            .||.||                 .:|||.|.
 Frog   100 KSACPS----------------------------LDESPP-----------------YSMPFKPY 119

  Fly   369 -------EAMRQGYPPNYDAAMFQRPLFSPALPFFAAVAFHQGQQQQQ-------QQQQQQSGLA 419
                   ..:|| ...||..|...|   ||:|         .|:::.|       ..::...||.
 Frog   120 AWDELARSELRQ-LVHNYRPAALDR---SPSL---------YGEREPQAPPTSLYSAERGLRGLY 171

  Fly   420 AGYHPDSQENLFRLRSLMVPLQSAGQNNSSAAAAAAAAAAAAVGVGVGVGVGVPPNGGHLGLPHS 484
            ..|.                 |:.|:.....|.                    ||..|.      
 Frog   172 GDYR-----------------QAIGRYGDPRAQ--------------------PPMYGE------ 193

  Fly   485 PHLHHFHHMAAKWPGLHQFSDL-----------YSCMKCEKMFSTPHGLEVHSRRTHHGKKPYAC 538
                       |...:...|||           |.|:||.|:||||||||||.||:|.|.:|:||
 Frog   194 -----------KAQSIKVESDLLCSRLLLNNGSYKCLKCSKVFSTPHGLEVHVRRSHSGTRPFAC 247

  Fly   539 ELCNKTFGHEVSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSDTRPYPCNYCGKRFHQ 603
            |:|.|||||.|||.||:|||:.|:.|:||.|||.||||||||||||||||||||||.||||||||
 Frog   248 EMCGKTFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQ 312

  Fly   604 KSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHKAFQRKVDLRRHKE 668
            ||||||||:||||||||||||||||||||||||||||||||:|||.|.||.|.||||||||||:|
 Frog   313 KSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRE 377

  Fly   669 TQH 671
            |||
 Frog   378 TQH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sens-2NP_001285692.1 COG5048 <504..672 CDD:227381 138/179 (77%)
C2H2 Zn finger 509..530 CDD:275368 16/20 (80%)
zf-H2C2_2 522..545 CDD:290200 14/22 (64%)
C2H2 Zn finger 538..558 CDD:275368 14/19 (74%)
zf-H2C2_2 550..575 CDD:290200 15/24 (63%)
C2H2 Zn finger 566..586 CDD:275368 17/19 (89%)
zf-H2C2_2 579..603 CDD:290200 22/23 (96%)
C2H2 Zn finger 594..614 CDD:275368 17/19 (89%)
zf-H2C2_2 606..631 CDD:290200 23/24 (96%)
C2H2 Zn finger 622..642 CDD:275368 19/19 (100%)
zf-H2C2_2 634..657 CDD:290200 18/22 (82%)
C2H2 Zn finger 650..677 CDD:275368 18/22 (82%)
gfi1XP_002933849.1 C2H2 Zn finger 218..239 CDD:275368 16/20 (80%)
C2H2 Zn finger 247..267 CDD:275368 14/19 (74%)
zf-H2C2_2 259..284 CDD:372612 15/24 (63%)
C2H2 Zn finger 275..295 CDD:275368 17/19 (89%)
COG5048 283..>352 CDD:227381 66/68 (97%)
C2H2 Zn finger 303..323 CDD:275368 17/19 (89%)
C2H2 Zn finger 331..351 CDD:275368 19/19 (100%)
C2H2 Zn finger 359..378 CDD:275368 14/18 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11058
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004101
OrthoInspector 1 1.000 - - otm48996
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2013
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.910

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