DRSC/TRiP Functional Genomics Resources

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Protein Alignment sens-2 and gfi1b

DIOPT Version :9

Sequence 1:NP_001285692.1 Gene:sens-2 / 33957 FlyBaseID:FBgn0051632 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001258770.1 Gene:gfi1b / 100151531 ZFINID:ZDB-GENE-091118-129 Length:334 Species:Danio rerio


Alignment Length:212 Identity:138/212 - (65%)
Similarity:158/212 - (74%) Gaps:22/212 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 HLGLPHSPHLHHFHHMAAKWPGLH-----------------QFSDLYSCMKCEKMFSTPHGLEVH 525
            |:|.  ||.|  .||.::.: |.|                 ..|:.|.|:.|:|:|||.||||||
Zfish   126 HMGF--SPSL--LHHASSLY-GAHLKQSAEPQPLDCSTHYSPSSNTYHCITCDKVFSTSHGLEVH 185

  Fly   526 SRRTHHGKKPYACELCNKTFGHEVSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSDTR 590
            .||:|.|.:|:.|.:|.|:|||.|||.||..||:.|:.||||.|||.||||||||||||||||||
Zfish   186 VRRSHSGTRPFECSICRKSFGHAVSLEQHMNVHSQERSFECKMCGKTFKRSSTLSTHLLIHSDTR 250

  Fly   591 PYPCNYCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHK 655
            ||||.||||||||||||||||||||||||||||||.||||||||||||||||||:|||.|::|.|
Zfish   251 PYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCQVCCKAFSQSSNLITHSRKHTGFKPFGCEICSK 315

  Fly   656 AFQRKVDLRRHKETQHT 672
            .||||||||||.|:||:
Zfish   316 GFQRKVDLRRHHESQHS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sens-2NP_001285692.1 COG5048 <504..672 CDD:227381 128/167 (77%)
C2H2 Zn finger 509..530 CDD:275368 14/20 (70%)
zf-H2C2_2 522..545 CDD:290200 12/22 (55%)
C2H2 Zn finger 538..558 CDD:275368 11/19 (58%)
zf-H2C2_2 550..575 CDD:290200 15/24 (63%)
C2H2 Zn finger 566..586 CDD:275368 17/19 (89%)
zf-H2C2_2 579..603 CDD:290200 22/23 (96%)
C2H2 Zn finger 594..614 CDD:275368 18/19 (95%)
zf-H2C2_2 606..631 CDD:290200 23/24 (96%)
C2H2 Zn finger 622..642 CDD:275368 18/19 (95%)
zf-H2C2_2 634..657 CDD:290200 17/22 (77%)
C2H2 Zn finger 650..677 CDD:275368 16/23 (70%)
gfi1bNP_001258770.1 TonB_N 18..93 CDD:292650
COG5048 <126..326 CDD:227381 133/204 (65%)
C2H2 Zn finger 169..190 CDD:275368 14/20 (70%)
C2H2 Zn finger 198..218 CDD:275368 11/19 (58%)
zf-H2C2_2 210..235 CDD:290200 15/24 (63%)
C2H2 Zn finger 226..246 CDD:275368 17/19 (89%)
C2H2 Zn finger 254..274 CDD:275368 18/19 (95%)
zf-H2C2_2 266..291 CDD:290200 23/24 (96%)
C2H2 Zn finger 282..302 CDD:275368 18/19 (95%)
C2H2 Zn finger 310..326 CDD:275368 11/15 (73%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11226
eggNOG 1 0.900 - - E33208_3BCNN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004101
OrthoInspector 1 1.000 - - otm24658
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3187
SonicParanoid 1 1.000 - - X2013
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.800

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