DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv2 and atp1b3b

DIOPT Version :10

Sequence 1:NP_477168.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571745.1 Gene:atp1b3b / 64272 ZFINID:ZDB-GENE-001127-1 Length:275 Species:Danio rerio


Alignment Length:320 Identity:76/320 - (23%)
Similarity:123/320 - (38%) Gaps:82/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KKKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDR 88
            |:.|.|..:|:.....:.||:..|||.|.:||:.|||.||.:..:.||...||||...||:. ||
Zfish    11 KQSSWKDFIYNPRTGEFIGRTASSWALIFLFYLVFYGFLAGMFTLTMWVMLQTLDDHTPKYR-DR 74

  Fly    89 SLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNC 153
            .   .||||..||       .|..|.:..:..:.|..:...|:.||..|           |....
Zfish    75 V---ANPGLMIRP-------RSLDIAFNRSIPQQYSKYVQHLEAFLQSY-----------NDSLQ 118

  Fly   154 DYNQPPPKG-----------QVCDVDIKTWSPCT--KENNYSYHKSAPCIFLKLNKIYGWIPEYY 205
            :.|:|..:|           :||.........|:  .:..:.|.:..|||.:|:|::.|..|   
Zfish   119 EANEPCQEGMYFEQDDVEEKKVCQFKRSQLRQCSGLSDTTFGYSEGNPCIIVKMNRVIGLKP--- 180

  Fly   206 NRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSC--EGENPADQENIGAVNYLPIRG-FPGYF 267
                                  :..|.      ::|  :|:.....:      ..|..| ....|
Zfish   181 ----------------------RGDPH------IACTVKGDGTLQMQ------LYPDEGKIDKSF 211

  Fly   268 YPYQNS---EGYLSPLVAVHFQRPKRGIII--NVECRAWARNIIH--DRKERIGSVHYEL 320
            :||...   :.|:.|||||.....:....|  .|||:....::::  :|.:.:|.|.:.:
Zfish   212 FPYYGKILHKNYVQPLVAVKLMLGENDYNIEHTVECKVEGSDLLNNDERDKFLGRVTFRI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_477168.1 Na_K-ATPase 18..317 CDD:459748 75/315 (24%)
atp1b3bNP_571745.1 Na_K-ATPase 6..268 CDD:459748 75/315 (24%)

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