DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv2 and nrv3

DIOPT Version :10

Sequence 1:NP_477168.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001260675.1 Gene:nrv3 / 35408 FlyBaseID:FBgn0032946 Length:313 Species:Drosophila melanogaster


Alignment Length:310 Identity:156/310 - (50%)
Similarity:209/310 - (67%) Gaps:4/310 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLD 78
            :||:.|.:..|.:..|:.:::||.:...||:..|||||.:||:.||..|....|.....|:||||
  Fly     8 EYYAPPVKMGKWEGFKKFLWNSETSQCLGRTGSSWAKILLFYIIFYAALTGFFAAIFTVFYQTLD 72

  Fly    79 PRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLT 143
            ...|||.||..|||:||||||||:||..||||||:||:.::.:|||:|.|....||..:....| 
  Fly    73 NEKPKWMLDNGLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKYHTYQDL- 136

  Fly   144 PGRGQNIYNCDYNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRS 208
              ..||..||.:..||...:||.:|..::||||.:||:.||.:.|||||||||||.||||.||.|
  Fly   137 --EKQNQVNCSFEHPPQDDKVCGIDFSSFSPCTADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 199

  Fly   209 NDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNS 273
            ..||.:||..||.:|.|.:..:|.:.|.:|||||||||||.|||.|.:|.|..|||.|::|::|.
  Fly   200 KTLPDHMPEELKQHIKEKQSLRPNETNVVWVSCEGENPADVENIKARDYYPRMGFPRYYFPFKNI 264

  Fly   274 EGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKERIGSVHYELLID 323
            :||:.|:|||.| ..:.|::||:||:||||||.|||.:|.||||:||::|
  Fly   265 QGYIPPIVAVQF-TVETGVLINIECKAWARNINHDRSDRRGSVHFELMVD 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_477168.1 Na_K-ATPase 18..317 CDD:459748 149/298 (50%)
nrv3NP_001260675.1 Na_K-ATPase 18..307 CDD:459748 148/292 (51%)

Return to query results.
Submit another query.