DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv2 and Atp1b3

DIOPT Version :9

Sequence 1:NP_001014475.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_037045.1 Gene:Atp1b3 / 25390 RGDID:2172 Length:279 Species:Rattus norvegicus


Alignment Length:324 Identity:83/324 - (25%)
Similarity:135/324 - (41%) Gaps:74/324 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RPKKKSLKQ-------MVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDP 79
            :.:|||..|       .:|:.....:.||:..||..|.:||:.|||.||||....||...|||:.
  Rat     3 KTEKKSFHQSLAEWKLFIYNPTSGEFLGRTSKSWGLILLFYLVFYGFLAALFTFTMWVMLQTLND 67

  Fly    80 RIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTP 144
            .:||:   |..| .:|||...|.||. .::.|   |..:....||.:.:.|.:||..|.|.    
  Rat    68 EVPKY---RDQI-PSPGLMVFPKPPT-ALDYT---YSMSDPHTYKKFVEDLKNFLKPYSVE---- 120

  Fly   145 GRGQNIYNCD----YNQPPPKGQVCDVDIKTWSPCT--KENNYSYHKSAPCIFLKLNKIYGWIPE 203
             ..:|:.:|.    ::|..|....|...:.....|:  .::|:.|.|..||:.:|:|:|...:|:
  Rat   121 -EQKNLTDCPGGALFHQEGPDYSACQFPVSLLQECSGVNDSNFGYSKGQPCVLVKMNRIIELVPD 184

  Fly   204 YYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLP------IRG 262
                      ..|     ||..:.|                    :|||..:...|      ::.
  Rat   185 ----------GAP-----YITCITK--------------------EENIANIVTYPDDGLIDLKY 214

  Fly   263 FPGYFYPYQNSEGYLSPLVAVH--FQRPKRGIIINVECRAWARNIIHDRKER---IGSVHYELL 321
            ||  :|..:...||..|||||.  |........:.:||:......:.::.||   :|.|.::::
  Rat   215 FP--YYGKKRHVGYRQPLVAVQVIFGADATKKEVTIECQIDGTRNLKNKNERDKFLGRVSFKVI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_001014475.1 Na_K-ATPase 24..317 CDD:278704 82/316 (26%)
Atp1b3NP_037045.1 Na_K_ATPase_bet 1..279 CDD:273446 83/324 (26%)
immunoglobulin-like. /evidence=ECO:0000250 186..279 25/118 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9102
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.930

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