DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv2 and nkb-3

DIOPT Version :9

Sequence 1:NP_001014475.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_510300.1 Gene:nkb-3 / 181494 WormBaseID:WBGene00010117 Length:317 Species:Caenorhabditis elegans


Alignment Length:309 Identity:94/309 - (30%)
Similarity:161/309 - (52%) Gaps:28/309 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RPKKKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTL 86
            :.:.::..|.:|:.:..:..||:..||.:|.:||:.||..|:|....|:..|.:||||::|::..
 Worm    20 KAEPETFAQFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSAFFIGCLSIFLRTLDPKVPRFYG 84

  Fly    87 DRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIY 151
            ..::||.|||:|::|... :|.:||||.:.....::::.:...||::|:.||....|...|.:..
 Worm    85 KGTIIGVNPGVGYQPWLK-ENPDSTLIKFNLQDSKSWEPYVKQLDNYLSKYKNTNETRDCGASDN 148

  Fly   152 N----CDYNQPPPKGQVCDVDIKTW--SPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRSND 210
            |    .|.:..|     |..|:..:  :.|..::.|.|....||:.:.||::.||.|..|:    
 Worm   149 NDALETDTDTFP-----CRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGWRPVNYD---- 204

  Fly   211 LPANMPASLK-TYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNSE 274
             ..::|..:| .|          |..:|.::|||....|:|::|.|.|:|..|..|.:|||....
 Worm   205 -DGSVPEEIKGRY----------KPGSITINCEGATSFDKEHLGKVKYIPETGIDGRYYPYVFVP 258

  Fly   275 GYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKERIGSVHYELLID 323
            .|..|:..|.|....|..::.|||||:|.||.||...|:|.|::||.::
 Worm   259 SYQQPIAMVKFDTIPRNKLVIVECRAYASNIEHDISTRLGMVYFELFVE 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_001014475.1 Na_K-ATPase 24..317 CDD:278704 91/299 (30%)
nkb-3NP_510300.1 Na_K-ATPase 24..300 CDD:278704 91/296 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167884
Domainoid 1 1.000 177 1.000 Domainoid score I2145
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128460
Inparanoid 1 1.050 183 1.000 Inparanoid score I2625
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm4764
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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