DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv2 and atp1b2b

DIOPT Version :9

Sequence 1:NP_001014475.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_571913.1 Gene:atp1b2b / 114457 ZFINID:ZDB-GENE-010718-1 Length:292 Species:Danio rerio


Alignment Length:318 Identity:88/318 - (27%)
Similarity:132/318 - (41%) Gaps:53/318 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KKSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRS 89
            |...|:..::.....:.||:..||..|.:||:|||..||.|..:.|:...||||...|.:. ||.
Zfish     6 KNGWKEFFWNPRTREFCGRTASSWGLILLFYLAFYIFLAGLFTLTMYVMLQTLDDHRPTYQ-DRL 69

  Fly    90 LIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCD 154
               :.||:..||     ..|...|.|.....|.::.:..:|::||:.|.....|    |..|.|.
Zfish    70 ---STPGMMIRP-----KGEQLEIAYTTEYTETWERYVQALNNFLSPYNDTVQT----QKNYECK 122

  Fly   155 YNQ-----------PPPKGQVCDVDIKTWSPCT--KENNYSYHKSAPCIFLKLNKIYGWIPEYYN 206
            .:|           ..|| :.|.........|:  .:..|.|.:..|||.:|||::.|.:|    
Zfish   123 PDQFFIQEDSGGLKNFPK-RSCQFKRSILEKCSGITDRFYGYDEGKPCIIIKLNRVIGLLP---- 182

  Fly   207 RSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLPIRG-FPGYFYPY 270
            ..:..|..:....|.|  :|.|.:       |..       |.:.:|.:.|.|..| |...:|||
Zfish   183 AKDGQPPYVTCGAKKY--KVGKDE-------WTD-------DSDKLGELAYYPPNGTFNLMYYPY 231

  Fly   271 QNSE---GYLSPLVAVHFQRPKRGIIINVECRAWARNIIH--DRKERIGSVHYELLID 323
            ...:   .|..|||||.|....|...:||||:..:.||..  :|.:..|.|.:.|.|:
Zfish   232 YGKKAQVNYSQPLVAVKFLNITRNEDVNVECKINSNNIPEGSERDKFAGRVSFTLRIN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_001014475.1 Na_K-ATPase 24..317 CDD:278704 85/310 (27%)
atp1b2bNP_571913.1 Na_K-ATPase 7..283 CDD:278704 84/309 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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