DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv2 and atp1b4

DIOPT Version :10

Sequence 1:NP_477168.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002931848.1 Gene:atp1b4 / 100490400 XenbaseID:XB-GENE-975977 Length:317 Species:Xenopus tropicalis


Alignment Length:337 Identity:85/337 - (25%)
Similarity:141/337 - (41%) Gaps:67/337 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DGFQQYYSRP----PERPKK------KSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAA 64
            ||.||:...|    .|..||      :.:|..:::.|.....||...|||.|.:||...|..||.
 Frog    23 DGRQQHPEEPGETNQEEQKKTWGEWIQDMKHFIWNPEKKEVLGRDKRSWALILLFYSVLYCFLAG 87

  Fly    65 LVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDS 129
            :.|:||:....|:.|.:|.:   |..: ..|||..||     ...:....:..::...:..:.:|
 Frog    88 MFALCMYGLLATISPYVPTY---RERV-FPPGLTIRP-----QANALYFAFNSSERSTWSSYAES 143

  Fly   130 LDDFLAVY-----KVPGL--TPGRGQNIYNCDYNQPPPKGQVCDVDIKTWSPCT--KENNYSYHK 185
            |:.||..|     |...|  |||:    |.....:...:.:.|.........|:  ::.::.:.:
 Frog   144 LNTFLEDYNDETQKEKNLVCTPGK----YFLQPGEDHEERKACQFSRSLLRNCSGIEDPSFGFAQ 204

  Fly   186 SAPCIFLKLNKIYGWIPEYYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQE 250
            ..|||.:|:|:|.|     |...:.:|                        |:|:|| ...||..
 Frog   205 GKPCILIKMNRILG-----YQAGSGIP------------------------IYVTCE-VLKADMS 239

  Fly   251 NIGAVNYLPIRGFPGYFYPYQNS---EGYLSPLVAVHFQRPKRGIIINVECRAWARNII--HDRK 310
            .:|.:::.|...|...:|||...   ..|.|||:|:.|...||...:||:|:...::||  |::.
 Frog   240 YLGPISFYPSDKFDLMYYPYYGKLTHVNYTSPLIAMQFTGVKRNEDVNVQCKINGKDIISDHEKD 304

  Fly   311 ERIGSVHYELLI 322
            ..:|.|.:.|.|
 Frog   305 RFLGRVAFTLHI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_477168.1 Na_K-ATPase 18..317 CDD:459748 78/322 (24%)
atp1b4XP_002931848.1 Na_K-ATPase 41..310 CDD:459748 76/311 (24%)

Return to query results.
Submit another query.