DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv2 and atp1b4

DIOPT Version :10

Sequence 1:NP_477168.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002664470.3 Gene:atp1b4 / 100037383 ZFINID:ZDB-GENE-070412-1 Length:347 Species:Danio rerio


Alignment Length:330 Identity:83/330 - (25%)
Similarity:142/330 - (43%) Gaps:63/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FQQYYSRPPERPKK------KSLKQMVYDSEDNSYFGRSMDSWAKIGIFYVAFYGVLAALVAICM 70
            |:::  :|..:||:      ..||..::::|...:.|||..||:.|.:||.|.|..|||:.|.||
Zfish    56 FEKW--KPKPKPKRTLHEKIDDLKTYLWNAETKEFMGRSGKSWSLILLFYAALYIFLAAMFAGCM 118

  Fly    71 WAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLA 135
            .....::.|..|.:. ||.:   .||:..  .|.||......|.:..:...:::.:..:|:..|.
Zfish   119 CCLMWSISPYAPTYN-DRVM---PPGMTM--FPHVDTAHGFDIAFNASDRSSWRRYAKTLEAHLK 177

  Fly   136 VYKVPGLTPGRGQNIYNCDYN--------QPPPKGQVCDVDIKTWSPCT--KENNYSYHKSAPCI 190
            .|. .||   :|:....|..|        :...:.:.|..:..:...|:  ::.::.|.|..|||
Zfish   178 PYD-DGL---QGRRNIACKGNAYFMQEDLEESAERKACQFNRSSLGACSGLQDKDFGYSKGRPCI 238

  Fly   191 FLKLNKIYGWIPEYYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAV 255
            .:|:|:|.|::|     ....|.|:...||....||                         :|.|
Zfish   239 LVKMNRILGYLP-----GQGTPVNVTCGLKKGSTEV-------------------------LGEV 273

  Fly   256 NYLPIRGFPGYFYPYQNS---EGYLSPLVAVHFQRPKRGIIINVECRAWARNIIHDR-KER-IGS 315
            .:.|...|...:|||...   ..|.||||||.|...:....::::|:...:.||:|. .:| :||
Zfish   274 KFFPNPNFDLRYYPYYGKLRHVNYSSPLVAVQFLNVQHDTPLHIQCKLNGKGIINDSPTDRFLGS 338

  Fly   316 VHYEL 320
            |.:.|
Zfish   339 VSFTL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv2NP_477168.1 Na_K-ATPase 18..317 CDD:459748 80/319 (25%)
atp1b4XP_002664470.3 None

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