DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv1 and Atp1b4

DIOPT Version :10

Sequence 1:NP_477167.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_445833.2 Gene:Atp1b4 / 84396 RGDID:620994 Length:356 Species:Rattus norvegicus


Alignment Length:305 Identity:88/305 - (28%)
Similarity:132/305 - (43%) Gaps:48/305 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPKWKLQD 84
            |.|..:|.:::|::.....|||:|.|.:|:.|..||..|||:.|:.:..|...||...|.:..|.
  Rat    84 KLQIVNEYLWDPEKRMSLARTGQSRSLILVIYFFFYASLAAVITLFIYMLFLAISPYMPTFTEQV 148

  Fly    85 SLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRDMK-HCGFGQV 148
            .    .||:..||.:....    ..|:..:|.....::..::.||:.||.:...:|. .|..||.
  Rat   149 K----PPGVMIRPFAHSLN----FNFNVSEPETWQRYVISLNGFLQGYNDSLQEEMNIDCPPGQY 205

  Fly   149 L-------EPTDVCVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIPEVYDKEEKDMPD 204
            .       |....|.........||...:  :||.|.||||.||:|:|.|:.||..|        
  Rat   206 FIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPEFGD-------- 262

  Fly   205 DLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFP-SQGFPSYYYPF---LNQPGYLSPLV 265
                           .|.|||....| |:.|.::|.|:| |..|...|||:   |....|.||||
  Rat   263 ---------------PVKVSCKVQKG-DENNIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLV 311

  Fly   266 AVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR-KGSVTFQILLD 309
            |:.|....|.|.:.|:|:...|.| .:..:.|| .|.:.|.:.::
  Rat   312 AMHFTDVVKNQEVPVQCQLKGKGI-VNDVINDRFVGRIIFTLNIE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_477167.1 Na_K-ATPase 20..303 CDD:459748 87/297 (29%)
Atp1b4NP_445833.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..77
Na_K-ATPase 81..349 CDD:459748 87/297 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.