DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b1b

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_571746.1 Gene:atp1b1b / 64273 ZFINID:ZDB-GENE-001127-4 Length:302 Species:Danio rerio


Alignment Length:323 Identity:99/323 - (30%)
Similarity:156/323 - (48%) Gaps:59/323 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PAKKQT---FSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPK 79
            ||:.:.   :.:.::|.::..|.||||.||:::.|||.|||..||.:|...:|.||.|:||.:|.
Zfish     2 PAQNKDDGGWKKFVWNSEKKEFLGRTGGSWAKIFLFYLIFYGCLAGIFIGTIQILLLTLSDYKPT 66

  Fly    80 WKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRD---MK 141
            |  ||.:  ..|||...|.|:::|    ||.:.........:::::.:||..|:..:..|   .:
Zfish    67 W--QDRV--APPGLTHFPRSDKSE----IAINLDDEVSFLNYVKVMREFLTSYDQEKQLDNMQFE 123

  Fly   142 HCGFGQV-------LEPTDV-----CVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIP 192
            :||...:       || :||     |..:.:..|.||..::  :|:|..:||:..|||:|..:.|
Zfish   124 NCGESPLDYKNRGDLE-SDVGVRRACQFSREWLGPCSGLDDPYFGFKEGKPCLIAKLNRIVNFRP 187

  Fly   193 EVYDKEEKDMPDDLKKVINETKTEERQQ------VWVSCNGHLGKDKENFQNIRYFP-SQGFPSY 250
            :             ..|.||:..||.|.      :.:.|.....:|......:||:. ..|||..
Zfish   188 K-------------PPVSNESIPEEVQHKVQPYLIPIHCTNKKEEDAGKLGEVRYYGFGGGFPLQ 239

  Fly   251 YYPF---LNQPGYLSPLVAVQF-NSPPKGQMLDVECRAWAKNIQYSGSVRDR---KGSVTFQI 306
            |||:   |..|.||.||||:|| |..|...| .:||:.:.:||.|..  :||   :..|.|.|
Zfish   240 YYPYYGKLLHPQYLQPLVAIQFLNITPNTDM-RIECKVYGENIYYHD--KDRYQGRFDVKFNI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 94/316 (30%)
atp1b1bNP_571746.1 Na_K-ATPase 5..301 CDD:298651 97/320 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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