DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b1b

DIOPT Version :10

Sequence 1:NP_477167.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_571746.1 Gene:atp1b1b / 64273 ZFINID:ZDB-GENE-001127-4 Length:302 Species:Danio rerio


Alignment Length:323 Identity:99/323 - (30%)
Similarity:156/323 - (48%) Gaps:59/323 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PAKKQT---FSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPK 79
            ||:.:.   :.:.::|.::..|.||||.||:::.|||.|||..||.:|...:|.||.|:||.:|.
Zfish     2 PAQNKDDGGWKKFVWNSEKKEFLGRTGGSWAKIFLFYLIFYGCLAGIFIGTIQILLLTLSDYKPT 66

  Fly    80 WKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRD---MK 141
            |  ||.:  ..|||...|.|:::|    ||.:.........:::::.:||..|:..:..|   .:
Zfish    67 W--QDRV--APPGLTHFPRSDKSE----IAINLDDEVSFLNYVKVMREFLTSYDQEKQLDNMQFE 123

  Fly   142 HCGFGQV-------LEPTDV-----CVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIP 192
            :||...:       || :||     |..:.:..|.||..::  :|:|..:||:..|||:|..:.|
Zfish   124 NCGESPLDYKNRGDLE-SDVGVRRACQFSREWLGPCSGLDDPYFGFKEGKPCLIAKLNRIVNFRP 187

  Fly   193 EVYDKEEKDMPDDLKKVINETKTEERQQ------VWVSCNGHLGKDKENFQNIRYFP-SQGFPSY 250
            :             ..|.||:..||.|.      :.:.|.....:|......:||:. ..|||..
Zfish   188 K-------------PPVSNESIPEEVQHKVQPYLIPIHCTNKKEEDAGKLGEVRYYGFGGGFPLQ 239

  Fly   251 YYPF---LNQPGYLSPLVAVQF-NSPPKGQMLDVECRAWAKNIQYSGSVRDR---KGSVTFQI 306
            |||:   |..|.||.||||:|| |..|...| .:||:.:.:||.|..  :||   :..|.|.|
Zfish   240 YYPYYGKLLHPQYLQPLVAIQFLNITPNTDM-RIECKVYGENIYYHD--KDRYQGRFDVKFNI 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_477167.1 Na_K-ATPase 20..303 CDD:459748 94/316 (30%)
atp1b1bNP_571746.1 Na_K-ATPase 5..301 CDD:471796 97/320 (30%)

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