DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b1a

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_571743.3 Gene:atp1b1a / 64267 ZFINID:ZDB-GENE-001127-3 Length:306 Species:Danio rerio


Alignment Length:309 Identity:92/309 - (29%)
Similarity:143/309 - (46%) Gaps:45/309 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PAKKQ---TFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPK 79
            ||.|.   .:...|:|..:..|.||||.||.::.:||.|||..||.:|...:|.:|.|:|:.:|.
Zfish     2 PANKDGDGGWKSFIWNSDKKEFLGRTGCSWLKIFIFYVIFYGCLAGIFIGTIQAMLLTLSNYKPT 66

  Fly    80 WKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDY--WIELIDDFLRDYNHTEGRD--- 139
            :  ||.:  ..|||...|..::.|....|      ..||.|  ::..||.||:.||....:|   
Zfish    67 Y--QDRV--APPGLSHSPRPDKAEINYNI------NDESTYLPYVNHIDAFLKAYNEDVQKDDTK 121

  Fly   140 MKHCG--------FGQVLEPTDV---CVVNTDLFGGCS-----KANNYGYKTNQPCIFLKLNKIF 188
            .:.||        .|::.....|   |....:..|.||     |..|||:...|||:.:|||:|.
Zfish   122 FEECGDKPQFYTDRGELESDNGVRKACRFRREWLGECSGQKDEKLKNYGFDDGQPCLIVKLNRIV 186

  Fly   189 GWIPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFP-SQGFPSYYY 252
            .::|.. ......:|:.::..:      :...:.:.|:....::......|:||. ..|||..||
Zfish   187 NFMPRP-PASNDSIPEAVRPKL------QGNVIPIHCSSKREEEANLLGQIKYFGLGTGFPLQYY 244

  Fly   253 PF---LNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298
            |:   |.||.||.||||::|.:......:.|||:.:.:||.||...|.:
Zfish   245 PYYGKLLQPQYLQPLVAIKFYNITTDVDVRVECKVYGENIDYSEKDRSQ 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 90/307 (29%)
atp1b1aNP_571743.3 Na_K-ATPase 8..303 CDD:298651 89/303 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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