DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b1

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001016488.1 Gene:atp1b1 / 548592 XenbaseID:XB-GENE-482813 Length:304 Species:Xenopus tropicalis


Alignment Length:302 Identity:95/302 - (31%)
Similarity:148/302 - (49%) Gaps:42/302 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KQT---FSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPKWKL 82
            |:|   :.:.|:||.:..|.||||.||.::||||.|||..||.:|...:|.||.|||:.|||:  
 Frog     7 KETDGGWRKFIWNPDKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEYEPKY-- 69

  Fly    83 QDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDY-NHTEGRD-MKHCGF 145
            ||.:  ..|||...|.:.:||    |.|....|...:.:::.::.|:..| |..:..| .:.||.
 Frog    70 QDRV--APPGLTQVPKAVKTE----INFSPNDPDSYNDYVQSMEKFISKYSNENQVSDKFEDCGT 128

  Fly   146 --GQVLEPTDV---------CVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIPEVYDK 197
              ||..|...:         ||........||..::  :|:...:||:.:|||:|..:.|  ...
 Frog   129 MPGQYRERGGLNKDGGQKKSCVFRRQWLQNCSGIDDQTFGFAEGKPCVIVKLNRIVAFKP--VPP 191

  Fly   198 EEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPS---QGFPSYYYPF---LN 256
            :...:|.::      |.......:.:.|.|...:|..|.:.::|:..   .|||..|||:   |.
 Frog   192 QNNSLPPEM------TANYNPYVIPIHCQGKRDEDIPNIREVKYYGMGGFAGFPLNYYPYYGKLL 250

  Fly   257 QPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298
            ||.||.||:||||.:......:.:||:|:.:||.|..  :||
 Frog   251 QPEYLQPLIAVQFTNLTFNTEIRIECKAYGENIDYHD--KDR 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 95/302 (31%)
atp1b1NP_001016488.1 Na_K_ATPase_bet 1..303 CDD:273446 95/302 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5426
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4563
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9519
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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