DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nrv1 and ATP1B1

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001668.1 Gene:ATP1B1 / 481 HGNCID:804 Length:303 Species:Homo sapiens


Alignment Length:313 Identity:105/313 - (33%)
Similarity:154/313 - (49%) Gaps:47/313 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AKGEFEFPQPAKKQ-TFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLST 72
            |:|:      ||:: ::.:.|:|.::..|.||||.||.::||||.|||..||.:|...:|.:|.|
Human     2 ARGK------AKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLT 60

  Fly    73 ISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEG 137
            ||:.:|.:  ||.:  ..|||...|..::||    |:|....|...:.::..|..||..|..:..
Human    61 ISEFKPTY--QDRV--APPGLTQIPQIQKTE----ISFRPNDPKSYEAYVLNIVRFLEKYKDSAQ 117

  Fly   138 RD---MKHCG-----------FGQVLEPTDVCVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNK 186
            ||   .:.||           |........||....:..|.||..|:  ||||..:|||.:|||:
Human   118 RDDMIFEDCGDVPSEPKERGDFNHERGERKVCRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNR 182

  Fly   187 IFGWIPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYF---PSQGFP 248
            :.|:.|:....|..:....:|...|...        |.|.|...:||:...|:.||   .|.|||
Human   183 VLGFKPKPPKNESLETYPVMKYNPNVLP--------VQCTGKRDEDKDKVGNVEYFGLGNSPGFP 239

  Fly   249 SYYYPF---LNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298
            ..|||:   |.||.||.||:||||.:......:.:||:|:.:||.|  |.:||
Human   240 LQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYGENIGY--SEKDR 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 102/302 (34%)
ATP1B1NP_001668.1 Na_K_ATPase_bet 1..303 CDD:273446 105/313 (34%)
immunoglobulin-like 191..303 38/110 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 139 1.000 Domainoid score I4783
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I4506
Isobase 1 0.950 - 0 Normalized mean entropy S5606
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm8622
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.960

Return to query results.
Submit another query.