DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and CG11703

DIOPT Version :10

Sequence 1:NP_477167.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_650792.1 Gene:CG11703 / 42307 FlyBaseID:FBgn0038690 Length:353 Species:Drosophila melanogaster


Alignment Length:307 Identity:82/307 - (26%)
Similarity:133/307 - (43%) Gaps:68/307 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQG------LLSTISDTEP 78
            |...:|:.|::..|...||||...|.::    |.||:||.||. :|:..      :|:.|...:|
  Fly    28 KDLPWSKRIFDIDEHKLFGRTALGWMRI----TGFYLVLYALI-VCIVAFWLGIFMLAIIDPNKP 87

  Fly    79 KWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEGRDMKHC 143
            :|     |.|. |||...|    .:..||:|:.....:|.:...:.|||||...|...       
  Fly    88 RW-----LKGP-PGLSMVP----NQNRSVLAYFTHIMSEVNPIADRIDDFLNKLNDNA------- 135

  Fly   144 GFGQVLEPTDVCVVNTDLFGGCSKANNYGYKTNQPCIFLKLNKIFGWIPEVYDKEEKDMPDDLKK 208
                           .|.|...::...:||.|.:|.:|:||||:.|::||.||..: |:|.:...
  Fly   136 ---------------IDFFADFNQDTTWGYATEKPTVFIKLNKVIGYVPETYDTPD-DLPKEAPA 184

  Fly   209 VINET--KTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSYYYPFLNQPGYLSPLVAVQFNS 271
            .:.:|  |.....::|::|....|...|    :.::|.    .|:....|..| ::.:||:|.|.
  Fly   185 SLQDTVGKLGNTPKIWITCEVTNGPKPE----MVFYPG----PYFEASENMRG-VTRVVAIQMNK 240

  Fly   272 PPKGQMLDVECRAWAKNI----QYSG--------SVR-DRKGSVTFQ 305
            .|:.......|:.||:||    .|.|        |:| |..|:..|:
  Fly   241 MPENAKTFFSCKVWARNIPIDDDYQGMGIIKFALSMRTDDDGNPDFE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_477167.1 Na_K-ATPase 20..303 CDD:459748 81/303 (27%)
CG11703NP_650792.1 Na_K-ATPase 40..267 CDD:471796 73/273 (27%)

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