DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b3

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_989087.1 Gene:atp1b3 / 394687 XenbaseID:XB-GENE-485127 Length:279 Species:Xenopus tropicalis


Alignment Length:324 Identity:100/324 - (30%)
Similarity:139/324 - (42%) Gaps:67/324 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKNNGKGAKGEFEFPQPAKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTIC 65
            |:|...||::        .....:.:.|||||.|.|.|||..||:.:||||.:||..||.|||:.
 Frog     1 MAKEENKGSE--------QSGSDWKQFIYNPQSGEFMGRTASSWALILLFYLVFYGFLAGLFTLT 57

  Fly    66 MQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLR 130
            |..:|.|:.|:.||::.:.|    :|||...|.|    .|..|.|...|......:|:.:..||.
 Frog    58 MWVMLQTLDDSVPKYRDRVS----SPGLMISPKS----AGLEIKFTRNKTQSYQEYIQTLHTFLT 114

  Fly   131 DYNHTEGRDMKHCGFGQVLEPTD-----VCVVNTDLFGGCS--KANNYGYKTNQPCIFLKLNKIF 188
            .||.........|..|...:..:     .|..|....|.||  :.|.:||...:||:.:|:|:|.
 Frog   115 PYNDAIQAKNDLCAPGLYFDQDEKDEKKACQFNRSSLGLCSGIEDNTFGYNEGKPCVIVKMNRII 179

  Fly   189 GWIPEVYDKEEKDMPDDLKKVINET-KTEERQQVWVSCNGHLGKDKENFQNIRYFPSQG------ 246
            |..||...|            ||.| |||:                   .|::|||..|      
 Frog   180 GLKPEGNPK------------INCTSKTED-------------------VNLQYFPENGKIDLMY 213

  Fly   247 FPSYYYPFLNQPGYLSPLVAVQFNSPPKGQMLD---VECRAWAKNIQYSGSVRDR-KGSVTFQI 306
            ||  ||.......|:.|||||:...||....||   :||:........:...||: .|.|||::
 Frog   214 FP--YYGKKTHVNYVQPLVAVKIIPPPYNSSLDEISLECKIHGSRNLKNEDERDKFLGRVTFKV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 93/300 (31%)
atp1b3NP_989087.1 Na_K-ATPase 14..272 CDD:366001 93/298 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5426
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4563
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9519
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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