DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b2

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_989070.1 Gene:atp1b2 / 394667 XenbaseID:XB-GENE-1007085 Length:306 Species:Xenopus tropicalis


Alignment Length:317 Identity:92/317 - (29%)
Similarity:132/317 - (41%) Gaps:65/317 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPK-WKLQDSLI 87
            |.|.::||:...|.|||..||..::.||.:||..|..:|.:.|..:|.||.:..|| |   |.| 
 Frog    17 FKEFMWNPRTREFMGRTASSWGLIVSFYLVFYAFLTGMFALSMYVMLQTIDEYTPKYW---DRL- 77

  Fly    88 GTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYW---IELIDDFLRDYNHT----------EGRD 139
             |:|||..||.::..|  .|.:..|     :..|   :..::..|..||.|          .|..
 Frog    78 -TSPGLMIRPKTDTLE--IVYSISG-----NSSWAPYVSQLNSMLDPYNDTVQMQQGSVCPSGVF 134

  Fly   140 MKHCGFGQVLE-PTDVCVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIPEVYDKEEKD 201
            .|....|.|.. |...|.......|.||...:  |||.|..||:.:|:|||..:.|.|       
 Frog   135 NKQDDTGDVRNYPKKACQFLRSSLGDCSGLTDPTYGYSTGSPCLLIKMNKIINFYPGV------- 192

  Fly   202 MPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPS--------------YYY 252
                :..:.|.:.|       ::|.|......:...:..|:||.. ||              .|:
 Frog   193 ----IPSLSNTSIT-------INCTGTTANMDQMLGSRTYYPSSN-PSNGTSNGTSLGTMDLMYF 245

  Fly   253 PFLN---QPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDRKGSVTFQI 306
            |:..   |..|..|||||:|.:....|.|.|:|||.|.||..:.|.....|.|:|::
 Frog   246 PYYGNRAQKNYSQPLVAVKFYNLTLNQDLYVQCRANAVNINTNDSQDKFSGRVSFKL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 90/312 (29%)
atp1b2NP_989070.1 Na_K-ATPase 15..299 CDD:366001 90/312 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5426
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H36075
Inparanoid 1 1.050 124 1.000 Inparanoid score I4563
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9519
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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