DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b3a

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_571296.2 Gene:atp1b3a / 30468 ZFINID:ZDB-GENE-990415-167 Length:278 Species:Danio rerio


Alignment Length:329 Identity:97/329 - (29%)
Similarity:150/329 - (45%) Gaps:74/329 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKNNGKGAKGEFEFPQPAKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTIC 65
            |||.:...|:|:    :|  :.::.:.||||:.|..||||.::|..:||||.:||..|||:|...
Zfish     1 MSKKSENPAEGK----EP--ESSWKDAIYNPRTGELFGRTARNWGLILLFYLVFYGFLAAMFVFT 59

  Fly    66 MQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLR 130
            :..:|.|::|..||::  |.:  .:|||..||.|...|      |:...|.|...:::.::.||.
Zfish    60 LWVMLQTLNDDTPKYR--DRV--ASPGLVIRPNSLNIE------FNRSDPLEYGQYVQHLESFLH 114

  Fly   131 DYNHTEGRDMKHCGFGQVLEP-----TDVCVVNTDLFGGCS--KANNYGYKTNQPCIFLKLNKIF 188
            .||.:|......|..||..|.     ..||.....|...||  :...:||...|||:.:|:|:|.
Zfish   115 QYNDSEQAKNDLCMAGQYSEQDGESLKKVCQFKRSLLYSCSGMEDTTFGYAKGQPCVIVKMNRII 179

  Fly   189 GWIPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQG------F 247
            |..|.                         ...:::|.....|..:    ::|||.:|      |
Zfish   180 GLKPS-------------------------GDPYINCTSKSVKPLQ----MQYFPHEGTIDRMYF 215

  Fly   248 PSYYYPFLNQPGYLSPLVAVQ-------FNSPPKGQMLDVECRAWAKNIQYSGSVRDR-KGSVTF 304
            |  ||......||:.|||||:       :||.     |.|||:....|:: :...||: .|.|||
Zfish   216 P--YYGKKTHKGYVQPLVAVKLLLKKEDYNSE-----LIVECKVEGSNLK-NNDERDKFLGRVTF 272

  Fly   305 QILL 308
            ::|:
Zfish   273 RVLV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 87/303 (29%)
atp1b3aNP_571296.2 Na_K-ATPase 13..271 CDD:278704 88/306 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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