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Protein Alignment nrv1 and Shbg
DIOPT Version :9
Sequence 1: | NP_001260163.1 |
Gene: | nrv1 / 33952 |
FlyBaseID: | FBgn0015776 |
Length: | 309 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006246648.1 |
Gene: | Shbg / 24775 |
RGDID: | 3671 |
Length: | 445 |
Species: | Rattus norvegicus |
Alignment Length: | 156 |
Identity: | 39/156 - (25%) |
Similarity: | 57/156 - (36%) |
Gaps: | 52/156 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 GAKGEF---EFPQP-AKKQTFS-EMIYNPQEGTFFGR-----TGKSWSQLLLFYTIFYIVLAALF 62
|...|| :.||| ....||| |:.:...:|. || ||.:.|.|.|......:||:
Rat 273 GTHAEFSLQDIPQPHTDPWTFSLELGFKLVDGA--GRLLTLGTGTNSSWLTLHLQDQTVVLS--- 332
Fly 63 TICMQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDD 127
|:.|||..|..:: || ||..:.:...|....|.| :|::..
Rat 333 -----------SEAEPKLALPLAV-----GL---PLQLKLDVFKVALSQGPK-------MEVLST 371
Fly 128 FL-------RDYNHTEGRDMKHCGFG 146
.| |.::|.:| |...|
Rat 372 SLLRLASLWRLWSHPQG----HLSLG 393
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
nrv1 | NP_001260163.1 |
Na_K-ATPase |
20..303 |
CDD:278704 |
33/140 (24%) |
Shbg | XP_006246648.1 |
Laminin_G_1 |
118..248 |
CDD:278483 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3927 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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