DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and Atp1b2

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_036639.2 Gene:Atp1b2 / 24214 RGDID:2171 Length:290 Species:Rattus norvegicus


Alignment Length:320 Identity:97/320 - (30%)
Similarity:147/320 - (45%) Gaps:62/320 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QPAKK------QTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISD 75
            |..||      :.:.|.::||:...|.||||.||:.:||||.:||..|.|:||:.|..:|.|:||
  Rat     4 QKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMWVMLQTVSD 68

  Fly    76 TEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYW---IELIDDFLRDYNHT-- 135
            ..||:  ||.|  ..|||..||   :||...||.    ..::::.|   ::.::.||..||.:  
  Rat    69 HTPKY--QDRL--ATPGLMIRP---KTENLDVIV----NISDTESWDQHVQKLNKFLEPYNDSIQ 122

  Fly   136 --------EGRDMKHCGFGQVLEPTDVCVVNTDLFGGCS---KANNYGYKTNQPCIFLKLNKIFG 189
                    .||..:....|.:..|...|..|....|.||   ...:|||.|.|||:|:|:|::..
  Rat   123 AQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDPTHYGYSTGQPCVFIKMNRVIN 187

  Fly   190 WIPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQG-FPSYYYP 253
            :.                       ....|.:.|:|.|...:|.||..:...||:.| ....|:|
  Rat   188 FY-----------------------AGANQSMNVTCVGKKDEDAENLGHFIMFPANGNIDLMYFP 229

  Fly   254 FLNQP---GYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR-KGSVTFQILLD 309
            :..:.   .|..|||||:|.:......::||||..|.||. :...||: .|.|.|::.::
  Rat   230 YYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIA-TDDERDKFAGRVAFKLRIN 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 94/309 (30%)
Atp1b2NP_036639.2 Na_K_ATPase_bet 2..289 CDD:273446 97/320 (30%)
immunoglobulin-like. /evidence=ECO:0000250 193..290 31/97 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4756
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36075
Inparanoid 1 1.050 137 1.000 Inparanoid score I4445
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm9102
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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