DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and nkb-3

DIOPT Version :10

Sequence 1:NP_477167.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_510300.1 Gene:nkb-3 / 181494 WormBaseID:WBGene00010117 Length:317 Species:Caenorhabditis elegans


Alignment Length:317 Identity:97/317 - (30%)
Similarity:170/317 - (53%) Gaps:28/317 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NGKGAKGEFEFPQPAKKQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGL 69
            ||:..|........|:.:||::.:||..:||..||||.||.|:.:||.||||.|:|.|..|:...
 Worm     7 NGEENKNLMNGEAKAEPETFAQFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSAFFIGCLSIF 71

  Fly    70 LSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNH 134
            |.|:....|::..:.::||.|||:|::|..::....::|.|:.:.....:.:::.:|::|..|.:
 Worm    72 LRTLDPKVPRFYGKGTIIGVNPGVGYQPWLKENPDSTLIKFNLQDSKSWEPYVKQLDNYLSKYKN 136

  Fly   135 T-EGRDMKHCGFGQVLEPTDVCVVNTDLF-----------GGCSKANNYGYKTNQPCIFLKLNKI 187
            | |.||   ||   ..:..|....:||.|           ..|...:.||||:.:||:.:.||::
 Worm   137 TNETRD---CG---ASDNNDALETDTDTFPCRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRL 195

  Fly   188 FGWIPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSYYY 252
            .||.|..||  :..:|:::|      ...:...:.::|.|....|||:...::|.|..|....||
 Worm   196 IGWRPVNYD--DGSVPEEIK------GRYKPGSITINCEGATSFDKEHLGKVKYIPETGIDGRYY 252

  Fly   253 PFLNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDRKGSVTFQILLD 309
            |::..|.|..|:..|:|::.|:.:::.|||||:|.||::  .:..|.|.|.|::.::
 Worm   253 PYVFVPSYQQPIAMVKFDTIPRNKLVIVECRAYASNIEH--DISTRLGMVYFELFVE 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_477167.1 Na_K-ATPase 20..303 CDD:459748 91/294 (31%)
nkb-3NP_510300.1 Na_K-ATPase 16..300 CDD:459748 92/299 (31%)

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