DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and Atp1b1

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_033851.1 Gene:Atp1b1 / 11931 MGIID:88108 Length:304 Species:Mus musculus


Alignment Length:322 Identity:108/322 - (33%)
Similarity:155/322 - (48%) Gaps:64/322 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AKGEFEFPQPAKKQ-TFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLST 72
            |:|:      ||:: ::.:.|:|.::..|.||||.||.::||||.|||..||.:|...:|.:|.|
Mouse     2 ARGK------AKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLT 60

  Fly    73 ISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHTEG 137
            ||:.:|.:  ||.:  ..|||...|..::||    |:|....|...:.::..|..||..|..:..
Mouse    61 ISELKPTY--QDRV--APPGLTQIPQIQKTE----ISFRPNDPKSYEAYVLNIIRFLEKYKDSAQ 117

  Fly   138 RD---MKHCGFGQVLEPTD------------VCVVNTDLFGGCSKAN--NYGYKTNQPCIFLKLN 185
            :|   .:.|| ....||.:            ||....|..|.||..|  :|||:..:|||.:|||
Mouse   118 KDDMIFEDCG-NVPSEPKERGDINHERGERKVCRFKLDWLGNCSGLNDDSYGYREGKPCIIIKLN 181

  Fly   186 KIFGWIP--------EVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYF 242
            ::.|:.|        |.|....|..|:.|.               |.|.|...:||:...||.||
Mouse   182 RVLGFKPKPPKNESLETYPLMMKYNPNVLP---------------VQCTGKRDEDKDKVGNIEYF 231

  Fly   243 PS---QGFPSYYYPF---LNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR 298
            ..   .|||..|||:   |.||.||.||:||||.:......:.|||:|:.:||.|  |.:||
Mouse   232 GMGGYYGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTVDTEIRVECKAYGENIGY--SEKDR 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 105/311 (34%)
Atp1b1NP_033851.1 Na_K_ATPase_bet 1..304 CDD:273446 108/322 (34%)
immunoglobulin-like. /evidence=ECO:0000250 191..304 41/118 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4946
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I4549
Isobase 1 0.950 - 0 Normalized mean entropy S5606
OMA 1 1.010 - - QHG45736
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm8856
orthoMCL 1 0.900 - - OOG6_104632
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.810

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