DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b2b

DIOPT Version :9

Sequence 1:NP_001260163.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_571913.1 Gene:atp1b2b / 114457 ZFINID:ZDB-GENE-010718-1 Length:292 Species:Danio rerio


Alignment Length:315 Identity:95/315 - (30%)
Similarity:146/315 - (46%) Gaps:57/315 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KQTFSEMIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLSTISDTEPKWKLQDS 85
            |..:.|..:||:...|.|||..||..:||||..|||.||.|||:.|..:|.|:.|..|.:  ||.
Zfish     6 KNGWKEFFWNPRTREFCGRTASSWGLILLFYLAFYIFLAGLFTLTMYVMLQTLDDHRPTY--QDR 68

  Fly    86 LIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHT----EGRDMKHCGF- 145
            |  :.||:..||..||.|    ||:..:.....:.:::.:::||..||.|    :..:.|...| 
Zfish    69 L--STPGMMIRPKGEQLE----IAYTTEYTETWERYVQALNNFLSPYNDTVQTQKNYECKPDQFF 127

  Fly   146 ------GQVLEPTDVCVVNTDLFGGCSKANN--YGYKTNQPCIFLKLNKIFGWIPEVYDKEEKDM 202
                  |....|...|.....:...||...:  |||...:|||.:|||::.|.:|          
Zfish   128 IQEDSGGLKNFPKRSCQFKRSILEKCSGITDRFYGYDEGKPCIIIKLNRVIGLLP---------- 182

  Fly   203 PDDLKKVINETKTEERQQVWVSCNG---HLGKDK-----ENFQNIRYFPSQG-FPSYYYPFLN-- 256
                        .::.|..:|:|..   .:|||:     :....:.|:|..| |...|||:..  
Zfish   183 ------------AKDGQPPYVTCGAKKYKVGKDEWTDDSDKLGELAYYPPNGTFNLMYYPYYGKK 235

  Fly   257 -QPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR-KGSVTFQILLD 309
             |..|..|||||:|.:..:.:.::|||:..:.||. .||.||: .|.|:|.:.::
Zfish   236 AQVNYSQPLVAVKFLNITRNEDVNVECKINSNNIP-EGSERDKFAGRVSFTLRIN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_001260163.1 Na_K-ATPase 20..303 CDD:278704 93/307 (30%)
atp1b2bNP_571913.1 Na_K-ATPase 7..283 CDD:278704 92/306 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5399
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36075
Inparanoid 1 1.050 125 1.000 Inparanoid score I4678
OMA 1 1.010 - - QHG45736
OrthoDB 1 1.010 - - D422722at33208
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 1 1.000 - - mtm6361
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4478
SonicParanoid 1 1.000 - - X254
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

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