DRSC/TRiP Functional Genomics Resources

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Protein Alignment nrv1 and atp1b4

DIOPT Version :10

Sequence 1:NP_477167.1 Gene:nrv1 / 33952 FlyBaseID:FBgn0015776 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_002931848.1 Gene:atp1b4 / 100490400 XenbaseID:XB-GENE-975977 Length:317 Species:Xenopus tropicalis


Alignment Length:319 Identity:90/319 - (28%)
Similarity:145/319 - (45%) Gaps:64/319 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EFPQPAKKQTFSE-------MIYNPQEGTFFGRTGKSWSQLLLFYTIFYIVLAALFTICMQGLLS 71
            |..|..:|:|:.|       .|:||::....||..:||:.:||||::.|..||.:|.:||.|||:
 Frog    34 ETNQEEQKKTWGEWIQDMKHFIWNPEKKEVLGRDKRSWALILLFYSVLYCFLAGMFALCMYGLLA 98

  Fly    72 TISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYN-HT 135
            |||...|.::.:    ...|||..||.:    .....||:..:.:....:.|.::.||.||| .|
 Frog    99 TISPYVPTYRER----VFPPGLTIRPQA----NALYFAFNSSERSTWSSYAESLNTFLEDYNDET 155

  Fly   136 EGRDMKHCGFGQ-VLEPTD------VCVVNTDLFGGCS--KANNYGYKTNQPCIFLKLNKIFGW- 190
            :......|..|: .|:|.:      .|..:..|...||  :..::|:...:|||.:|:|:|.|: 
 Frog   156 QKEKNLVCTPGKYFLQPGEDHEERKACQFSRSLLRNCSGIEDPSFGFAQGKPCILIKMNRILGYQ 220

  Fly   191 ----IPEVYDKEEKDMPDDLKKVINETKTEERQQVWVSCNGHLGKDKENFQNIRYFPSQGFPSYY 251
                ||                            ::|:|. .|..|......|.::||..|...|
 Frog   221 AGSGIP----------------------------IYVTCE-VLKADMSYLGPISFYPSDKFDLMY 256

  Fly   252 YPF---LNQPGYLSPLVAVQFNSPPKGQMLDVECRAWAKNIQYSGSVRDR-KGSVTFQI 306
            ||:   |....|.|||:|:||....:.:.::|:|:...|:| .|...:|| .|.|.|.:
 Frog   257 YPYYGKLTHVNYTSPLIAMQFTGVKRNEDVNVQCKINGKDI-ISDHEKDRFLGRVAFTL 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nrv1NP_477167.1 Na_K-ATPase 20..303 CDD:459748 86/308 (28%)
atp1b4XP_002931848.1 Na_K-ATPase 41..310 CDD:459748 86/306 (28%)

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