DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and znf470

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:NP_001107698.2 Gene:znf470 / 779587 XenbaseID:XB-GENE-5883472 Length:401 Species:Xenopus tropicalis


Alignment Length:381 Identity:197/381 - (51%)
Similarity:256/381 - (67%) Gaps:0/381 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   165 SILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCDECGKVFNWWSQLTNHKKI 229
            ||....|.:.:..|.:||.||||.::...:|..|:|:||||||:.|.||||.|...|:|..|:::
 Frog     2 SIPNSQKELPSVIKRFKCPECGKRYSSKGSLIIHQRVHTGEKPFMCTECGKRFTEKSKLIIHQRV 66

Human   230 HTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKC 294
            ||||||:.|.||.|.|:....|..|:::|:||||:.|.||||.|.:.:.|..|:.:||||||:.|
 Frog    67 HTGEKPFMCTECGKSFSKKYGLVVHQRVHTGEKPFMCTECGKRFAEKNYLIIHQTVHTGEKPFTC 131

Human   295 KECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHRRIHTGEKPYKCEECGKAFTQ 359
            .||.|.|::......|:|:|||||.:.|.|||..|:..|.|..|:||||||||:.|.|||::|..
 Frog   132 TECGKGFSEKRKFVIHQRVHTGEKSFTCTECGKCFSVKSGLKSHQRIHTGEKPFTCIECGESFRH 196

Human   360 FASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKR 424
            .|||..||..||||||:.|.||||:.:|.:.|..|:|||||||||.|.|||::||..|||.:|:|
 Frog   197 KASLKEHKIKHTGEKPFTCPECGKSCSRQTDLEIHQRIHTGEKPYPCTECGKSFTINSNLVRHQR 261

Human   425 IHTGEKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYK 489
            ||||.||:.|.||.|:|:....|:.|:|:|||.||:.|.||||.|.:...|..|...||||||:.
 Frog   262 IHTGIKPFACTECHKSFSAHHKLSLHKRVHTGEKPFTCTECGKSFSRKDSLQYHYTTHTGEKPFT 326

Human   490 CKECGKAFYQSSILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYK 545
            |.||||.|.:.|.|..|:.|||.|||:.|.||||:|:...:||.|.|||||||..|
 Frog   327 CTECGKCFSKKSSLQCHRVIHTGEKPFACAECGKSFSLKRNLTNHHRIHTGEKPLK 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171
COG5048 138..536 CDD:227381 189/370 (51%)
C2H2 Zn finger 154..174 CDD:275368 3/8 (38%)
C2H2 Zn finger 182..202 CDD:275368 8/19 (42%)
C2H2 Zn finger 210..230 CDD:275368 9/19 (47%)
C2H2 Zn finger 238..258 CDD:275368 7/19 (37%)
C2H2 Zn finger 266..286 CDD:275368 8/19 (42%)
C2H2 Zn finger 294..314 CDD:275368 7/19 (37%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 10/19 (53%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 11/19 (58%)
C2H2 Zn finger 434..454 CDD:275368 8/19 (42%)
C2H2 Zn finger 462..482 CDD:275368 8/19 (42%)
C2H2 Zn finger 490..510 CDD:275368 9/19 (47%)
C2H2 Zn finger 518..538 CDD:275368 10/19 (53%)
zf-H2C2_2 530..555 CDD:463886 11/16 (69%)
znf470NP_001107698.2 COG5048 17..372 CDD:227381 184/354 (52%)
C2H2 Zn finger 19..39 CDD:275368 8/19 (42%)
C2H2 Zn finger 47..67 CDD:275368 9/19 (47%)
C2H2 Zn finger 75..95 CDD:275368 7/19 (37%)
C2H2 Zn finger 103..123 CDD:275368 8/19 (42%)
C2H2 Zn finger 131..151 CDD:275368 7/19 (37%)
C2H2 Zn finger 159..179 CDD:275368 9/19 (47%)
C2H2 Zn finger 187..207 CDD:275368 10/19 (53%)
C2H2 Zn finger 215..235 CDD:275368 9/19 (47%)
C2H2 Zn finger 243..263 CDD:275368 11/19 (58%)
C2H2 Zn finger 271..291 CDD:275368 8/19 (42%)
C2H2 Zn finger 299..319 CDD:275368 8/19 (42%)
C2H2 Zn finger 327..347 CDD:275368 9/19 (47%)
C2H2 Zn finger 355..375 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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