DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and SPOM_SPAC11D3.17

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:NP_001342806.1 Gene:SPOM_SPAC11D3.17 / 2543006 PomBaseID:SPAC11D3.17 Length:585 Species:Schizosaccharomyces pombe


Alignment Length:69 Identity:25/69 - (36%)
Similarity:38/69 - (55%) Gaps:8/69 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   250 QLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKEC---CKAFNKFSNLTQH- 310
            :||....|.| ::.:||::|.|.||:..|||:||..|:..:|..|..|   ||   :...|.:| 
pombe    18 KLTEPSLIDS-KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCK---RKDLLKRHI 78

Human   311 KRIH 314
            :|.|
pombe    79 QRFH 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171
COG5048 138..536 CDD:227381 25/69 (36%)
C2H2 Zn finger 154..174 CDD:275368
C2H2 Zn finger 182..202 CDD:275368
C2H2 Zn finger 210..230 CDD:275368
C2H2 Zn finger 238..258 CDD:275368 2/7 (29%)
C2H2 Zn finger 266..286 CDD:275368 10/19 (53%)
C2H2 Zn finger 294..314 CDD:275368 7/23 (30%)
C2H2 Zn finger 322..342 CDD:275368
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 462..482 CDD:275368
C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 518..538 CDD:275368
zf-H2C2_2 530..555 CDD:463886
SPOM_SPAC11D3.17NP_001342806.1 COG5048 1..527 CDD:227381 25/69 (36%)
C2H2 Zn finger 33..53 CDD:275368 10/19 (53%)
C2H2 Zn finger 61..82 CDD:275368 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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