DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and Zfp748

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:NP_001388796.1 Gene:Zfp748 / 102549842 RGDID:7600894 Length:889 Species:Rattus norvegicus


Alignment Length:815 Identity:317/815 - (38%)
Similarity:383/815 - (46%) Gaps:276/815 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    40 LQGLLAFSDVVIEFSPEEWACLDPAQRNLYRDVMFENYRNLVSLA-------------------- 84
            ::.:|:|.||.|:||.|||.||||||.|||||||.|||.|||.|.                    
  Rat     1 MEEMLSFRDVAIDFSAEEWECLDPAQWNLYRDVMLENYSNLVFLGLAFSKPYLVTFLEQRQEPSD 65

Human    85 -------------ILSYSIQD-------------------------------------LLPEQDM 99
                         |..|..:|                                     :|.|..:
  Rat    66 EKKQVGATTMHPDIKPYKCKDCGKACDWNSLLLEHQRTNPGENAYKCEECGKASGSCSVLSEHRI 130

Human   100 KDL---------CQKVT------------------------------------------------ 107
            .|.         |.||.                                                
  Rat   131 IDTEEKAYKCEECGKVMCTCSGNSSYRRICIGENPYKCEECGKAFSTYSYLAQHEVEHTGQKFYN 195

Human   108 -------------LTRHRS-WGLDNL--------------HLVKDWRTVNEGKGQK--EYCNRLT 142
                         ||.|:. ...:||              .|.||.....|.|..:  ||....:
  Rat   196 CEECGKMFYFPSHLTEHQKIHSQENLFKIEVCSEIFCAPIELSKDQTFCTEEKPYRYEEYVKAFS 260

Human   143 QCS-------------------------------------------------------------- 145
            .||                                                              
  Rat   261 ACSLLSEHPRIHPGEKAFKCEECGNAFCTLHSVSKVNIHCEVKSYKCEECGKAFASHLSLIQHKI 325

Human   146 -STKSKIFQCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYK 209
             .|:.|.:||.|||:.|...|.|.:|:..|:.|||||||.|||||..|..|:||.|||:||||||
  Rat   326 GHTREKPYQCEECGKMFYCSSNLKQHQITHSQEKPYKCEVCGKVFRTCWQLSKHLRIHSGEKPYK 390

Human   210 CDECGKVFNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFT 274
            |:||||.|...|.||.||..|||||||||:||.|.|.:.|.|..|..||||||||.|:||||.|.
  Rat   391 CEECGKAFYTLSYLTQHKLGHTGEKPYKCEECGKTFYYPSVLKEHLAIHSGEKPYRCDECGKEFC 455

Human   275 QFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHR 339
            ..|..::|:|||||||||||::|.|||:..|.|:.||.:|||.|||||||||..|...|.|..|:
  Rat   456 TRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHHKIVHTGHKPYKCEECGKKFYYPSRLKEHQ 520

Human   340 RIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTF------------------N 386
            |||:.|.|||||.|||||..::..|:||..|||||||:||||||||                  .
  Rat   521 RIHSQENPYKCEICGKAFHTYSYFTQHKLGHTGEKPYKCEECGKTFYYPSILKEHLVIHSGKKPY 585

Human   387 RC----------SHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAF 441
            ||          |..|.|:||||||||:|||.||:.|:..|.|||||.:|:|||||:|:||||.|
  Rat   586 RCDECGKDFCTRSGHSRHQRIHTGEKPHKCEVCGKVFSTHSYLTQHKVVHSGEKPYRCEECGKKF 650

Human   442 NKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYKCKECGKAFYQSSILSKH 506
            ...|.|.:|:|:|:...|||||.||.||.....|:.|:|.|.|||||||:||||.||..|.|.:|
  Rat   651 YYPSRLKEHQRVHSQGNPYKCEICGNVFCTPKGLSKHQRFHMGEKPYKCEECGKMFYYPSRLKEH 715

Human   507 KRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYKCKECGKGFYQSSI------------- 558
            :|||::|.|||||.|||||...|.||:||..|||||.|||:||||.||..||             
  Rat   716 QRIHSQENPYKCEICGKAFYTHSYLTQHKLGHTGEKPYKCEECGKTFYYPSILKEHLAIHSGKKP 780

Human   559 ---------------HSKYKRIYTGEEPDKCKKCG 578
                           .|:::||:|||:|.||::||
  Rat   781 YKCDECGKDFCTRSGRSRHQRIHTGEKPYKCEQCG 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171 29/39 (74%)
COG5048 138..536 CDD:227381 238/488 (49%)
C2H2 Zn finger 154..174 CDD:275368 8/19 (42%)
C2H2 Zn finger 182..202 CDD:275368 12/19 (63%)
C2H2 Zn finger 210..230 CDD:275368 11/19 (58%)
C2H2 Zn finger 238..258 CDD:275368 8/19 (42%)
C2H2 Zn finger 266..286 CDD:275368 9/19 (47%)
C2H2 Zn finger 294..314 CDD:275368 9/19 (47%)
C2H2 Zn finger 322..342 CDD:275368 10/19 (53%)
C2H2 Zn finger 350..370 CDD:275368 10/19 (53%)
C2H2 Zn finger 378..398 CDD:275368 14/47 (30%)
C2H2 Zn finger 406..426 CDD:275368 11/19 (58%)
C2H2 Zn finger 434..454 CDD:275368 10/19 (53%)
C2H2 Zn finger 462..482 CDD:275368 9/19 (47%)
C2H2 Zn finger 490..510 CDD:275368 11/19 (58%)
C2H2 Zn finger 518..538 CDD:275368 12/19 (63%)
zf-H2C2_2 530..555 CDD:463886 17/24 (71%)
Zfp748NP_001388796.1 KRAB 5..63 CDD:214630 30/57 (53%)
C2H2 Zn finger 84..104 CDD:275368 1/19 (5%)
C2H2 Zn finger 112..132 CDD:275368 2/19 (11%)
C2H2 Zn finger 140..160 CDD:275368 3/19 (16%)
C2H2 Zn finger 168..188 CDD:275368 0/19 (0%)
C2H2 Zn finger 196..216 CDD:275368 3/19 (16%)
C2H2 Zn finger 252..272 CDD:275368 4/19 (21%)
C2H2 Zn finger 280..299 CDD:275368 0/18 (0%)
COG5048 303..736 CDD:227381 232/432 (54%)
C2H2 Zn finger 307..327 CDD:275368 0/19 (0%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 12/19 (63%)
C2H2 Zn finger 391..411 CDD:275368 11/19 (58%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 9/19 (47%)
C2H2 Zn finger 503..523 CDD:275368 10/19 (53%)
C2H2 Zn finger 531..551 CDD:275368 10/19 (53%)
C2H2 Zn finger 559..579 CDD:275368 8/19 (42%)
C2H2 Zn finger 587..607 CDD:275368 5/19 (26%)
C2H2 Zn finger 615..635 CDD:275368 11/19 (58%)
C2H2 Zn finger 643..663 CDD:275368 10/19 (53%)
C2H2 Zn finger 671..691 CDD:275368 9/19 (47%)
C2H2 Zn finger 699..719 CDD:275368 11/19 (58%)
C2H2 Zn finger 727..747 CDD:275368 12/19 (63%)
C2H2 Zn finger 755..775 CDD:275368 9/19 (47%)
zf-H2C2_2 768..790 CDD:463886 0/21 (0%)
C2H2 Zn finger 783..803 CDD:275368 2/19 (11%)
zf-H2C2_2 798..820 CDD:463886 10/18 (56%)
SFP1 <805..872 CDD:227516 7/11 (64%)
C2H2 Zn finger 811..831 CDD:275368 3/5 (60%)
C2H2 Zn finger 839..859 CDD:275368
C2H2 Zn finger 867..887 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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