DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and Zfp623

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:NP_001385918.1 Gene:Zfp623 / 102547932 RGDID:7635192 Length:499 Species:Rattus norvegicus


Alignment Length:540 Identity:228/540 - (42%)
Similarity:318/540 - (58%) Gaps:74/540 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    61 LDPA---QRNLYRDVMFENYRNLVSLAILSYSIQD-----------LLPEQDMKDLCQKVTLTRH 111
            |:|:   .|..:.|.:.:...|..:.::.|.|.||           .:...|...:|.|    ..
  Rat     9 LEPSVSESREFHEDRLAQLLENPETQSLESPSCQDGGFTQMTVAHWKIQTGDTAPVCSK----SG 69

Human   112 RSWGLD-NLHLVKDWRTVNEGKGQKEYCNRLTQCSSTKSKIFQCIECGRNFSWRSILTEHKRIHT 175
            |:..|| ||.:::  |.:.||:              |:|    |...|:||.:.|.:..|:..|:
  Rat    70 RNPILDSNLLILQ--RELIEGE--------------TRS----CGVGGKNFPFNSDVDPHQVSHS 114

Human   176 GEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCDECGKVFNWWSQLTNHKKIHTGEKPYKCDE 240
            |||.|||:.|||.|::.|.||:|:|:||.::...|:.|||.|..::.|..|:.:||||||:|   
  Rat   115 GEKSYKCDHCGKGFSQTSLLTEHQRVHTRDRLCVCNVCGKDFIHYANLMEHQLVHTGEKPFK--- 176

Human   241 CDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFS 305
                                     |.:|||||...|:|.:|:|:||.|:|::||||.|.|::.|
  Rat   177 -------------------------CAQCGKAFCHSSDLLRHQRVHTRERPFECKECGKGFSQSS 216

Human   306 NLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHRRIHTGEKPYKCEECGKAFTQFASLTRHKRIH 370
            .|.:|:||||||:||:|.|||..|...|.|.||.:|||..|.|:|.:|||||...:.|..|:|||
  Rat   217 LLIRHQRIHTGERPYECNECGKSFIRSSSLIRHYQIHTEVKQYECRDCGKAFRHRSDLIEHQRIH 281

Human   371 TGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCK 435
            |||:|::|.||||.|.|.|.|..|:||||||:||.|.|||:.|:|.||.|||:|||||||.|:|.
  Rat   282 TGERPFECHECGKAFIRSSKLIQHQRIHTGERPYVCNECGKRFSQTSNFTQHQRIHTGEKLYECN 346

Human   436 ECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYKCKECGKAFYQS 500
            ||||||...|.|.:|::||||.:.|:|:||||.|.|.:|||.|::||||::|::||:|||||.||
  Rat   347 ECGKAFFLSSYLIRHQKIHTGERVYECKECGKAFLQKAHLTEHQKIHTGDRPFECKDCGKAFIQS 411

Human   501 SILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYKCKECGKGFY-------QSSI 558
            |.|..|:.:||.||||.|..|||.|.|.|:..:|:::||.||.||..|.||...       |..:
  Rat   412 SKLLLHQIVHTGEKPYVCSYCGKGFIQRSNFLQHQKMHTEEKLYKYSEHGKDLAPPPDLVPQEDL 476

Human   559 HSKYKRIYTGEEPDKCKKCG 578
            ......::.||.....::||
  Rat   477 SLSETSVHLGETATDQERCG 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171 5/24 (21%)
COG5048 138..536 CDD:227381 194/397 (49%)
C2H2 Zn finger 154..174 CDD:275368 6/19 (32%)
C2H2 Zn finger 182..202 CDD:275368 10/19 (53%)
C2H2 Zn finger 210..230 CDD:275368 7/19 (37%)
C2H2 Zn finger 238..258 CDD:275368 0/19 (0%)
C2H2 Zn finger 266..286 CDD:275368 10/19 (53%)
C2H2 Zn finger 294..314 CDD:275368 10/19 (53%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 11/19 (58%)
C2H2 Zn finger 406..426 CDD:275368 12/19 (63%)
C2H2 Zn finger 434..454 CDD:275368 10/19 (53%)
C2H2 Zn finger 462..482 CDD:275368 11/19 (58%)
C2H2 Zn finger 490..510 CDD:275368 12/19 (63%)
C2H2 Zn finger 518..538 CDD:275368 8/19 (42%)
zf-H2C2_2 530..555 CDD:463886 10/31 (32%)
Zfp623NP_001385918.1 C2H2 Zn finger 93..113 CDD:275370 6/19 (32%)
COG5048 <108..322 CDD:227381 114/241 (47%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
C2H2 Zn finger 177..197 CDD:275368 10/19 (53%)
C2H2 Zn finger 205..225 CDD:275368 10/19 (53%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 261..281 CDD:275368 9/19 (47%)
C2H2 Zn finger 289..309 CDD:275368 11/19 (58%)
zf-C2H2 315..337 CDD:395048 13/21 (62%)
C2H2 Zn finger 317..337 CDD:275368 12/19 (63%)
zf-H2C2_2 329..352 CDD:463886 17/22 (77%)
C2H2 Zn finger 345..365 CDD:275368 10/19 (53%)
zf-H2C2_2 357..382 CDD:463886 13/24 (54%)
C2H2 Zn finger 373..393 CDD:275368 11/19 (58%)
zf-H2C2_2 385..410 CDD:463886 16/24 (67%)
C2H2 Zn finger 401..421 CDD:275368 12/19 (63%)
C2H2 Zn finger 429..449 CDD:275368 8/19 (42%)

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