DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and LOC101886363

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:XP_073803787.1 Gene:LOC101886363 / 101886363 -ID:- Length:417 Species:Danio rerio


Alignment Length:396 Identity:212/396 - (53%)
Similarity:273/396 - (68%) Gaps:1/396 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   147 TKSKIFQCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCD 211
            |..|.|.|.:||::||..|.|..|..|||||||:.|.:|||.|::.|||..|..|||||||:.|.
Zfish     5 TGEKTFTCPQCGKSFSQSSNLNLHMMIHTGEKPFTCPQCGKSFSQSSNLNLHMMIHTGEKPFTCT 69

Human   212 ECGKVFNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQF 276
            :|||.|...|.|..|.:|||||||:.|.:|.|.|:..|.|..|.::|:||||:.|.:|||:|:|.
Zfish    70 QCGKSFIHSSSLNQHMRIHTGEKPFSCTQCGKSFDCSSHLNKHMRVHTGEKPFTCTQCGKSFSQS 134

Human   277 SNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHRRI 341
            |:|.:|.|.||.|||:.|.:|.|:|::.|.|..|..|||||||:.|.:||..|:..|||.:|.|:
Zfish   135 SSLNKHIRNHTREKPFTCTQCGKSFSQSSFLNLHMMIHTGEKPFSCTQCGKSFDCSSHLNKHMRV 199

Human   342 HTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKC 406
            |.||||:.|.:|||:|...:||.:|.||||||||:.|.:|||.|:|.|.|..|.||||.|||:.|
Zfish   200 HPGEKPFTCTQCGKSFINSSSLNQHMRIHTGEKPFTCTQCGKRFSRSSSLKKHMRIHTREKPFIC 264

Human   407 EECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLTQHRRIHTG-VKPYKCEECGKVFK 470
            .:||::|:|.|....|..|||||||:.|.:|||:|.:.|||..|..|||| .||:.|.:|||.|.
Zfish   265 TQCGKSFSQSSFFNLHMMIHTGEKPFPCSQCGKSFIRSSSLNLHMMIHTGEKKPFTCTQCGKRFI 329

Human   471 QCSHLTSHKRIHTGEKPYKCKECGKAFYQSSILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHK 535
            ..|.|..|.||||||||:.|.:|||:|..||.|:||.|:||.|||:.|.:|||:|:|.|||.:|.
Zfish   330 HSSSLNQHMRIHTGEKPFTCTQCGKSFDCSSHLNKHMRVHTGEKPFTCSQCGKSFSQSSSLNKHM 394

Human   536 RIHTGE 541
            ||||.|
Zfish   395 RIHTRE 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171
COG5048 138..536 CDD:227381 207/389 (53%)
C2H2 Zn finger 154..174 CDD:275368 8/19 (42%)
C2H2 Zn finger 182..202 CDD:275368 9/19 (47%)
C2H2 Zn finger 210..230 CDD:275368 8/19 (42%)
C2H2 Zn finger 238..258 CDD:275368 7/19 (37%)
C2H2 Zn finger 266..286 CDD:275368 10/19 (53%)
C2H2 Zn finger 294..314 CDD:275368 7/19 (37%)
C2H2 Zn finger 322..342 CDD:275368 9/19 (47%)
C2H2 Zn finger 350..370 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 10/19 (53%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 9/19 (47%)
C2H2 Zn finger 462..482 CDD:275368 9/19 (47%)
C2H2 Zn finger 490..510 CDD:275368 11/19 (58%)
C2H2 Zn finger 518..538 CDD:275368 11/19 (58%)
zf-H2C2_2 530..555 CDD:463886 8/12 (67%)
LOC101886363XP_073803787.1 None
Blue background indicates that the domain is not in the aligned region.

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