DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF678 and LOC101885920

DIOPT Version :10

Sequence 1:NP_848644.2 Gene:ZNF678 / 339500 HGNCID:28652 Length:580 Species:Homo sapiens
Sequence 2:XP_021331366.2 Gene:LOC101885920 / 101885920 -ID:- Length:501 Species:Danio rerio


Alignment Length:484 Identity:221/484 - (45%)
Similarity:317/484 - (65%) Gaps:14/484 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    96 EQDMKDLCQKVTLTRHRSWGLDNLHLVKDWRTVNEGKGQKEYCNRLTQCSSTKSKI--------- 151
            :::.:|:..:.|.|..:....:...|:::    |||..::::..::.:.:..::::         
Zfish     5 KEESEDVKIEETFTIKQEDLQEQTDLIEE----NEGSKEEKHHVKIEEKNHLQTEVILKRRDKNC 65

Human   152 FQCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCDECGKV 216
            |.|.:||::|..:..|..|.|||||||.:.|.:|||.|::.|||..|..|||||||:.|.:|||.
Zfish    66 FTCTQCGKSFGRKDDLKIHMRIHTGEKTFTCTQCGKSFSQSSNLNLHMMIHTGEKPFTCTQCGKS 130

Human   217 FNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQ 281
            |...|.|..|.:|||||||:.|.:|.|.|...|.|..|.:||:||||:.|.:|||:|...|:|.:
Zfish   131 FIHSSSLNQHMRIHTGEKPFTCTQCGKSFIHSSSLNQHMRIHTGEKPFSCTQCGKSFDCSSHLNK 195

Human   282 HKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHRRIHTGEK 346
            |.|:||||||:.|.:|.|:|::.|:|.:|.|.||.|||:.|.:||..|::.|.|..|..||||||
Zfish   196 HMRVHTGEKPFTCTQCGKSFSQSSSLNKHIRNHTREKPFTCTQCGKSFSQSSFLNLHMMIHTGEK 260

Human   347 PYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGR 411
            |:.|.:|||:|...:.|.:|.|:||||||:.|.:|||:|...|.|:.|.||||||||:.|.:||:
Zfish   261 PFTCTQCGKSFDCSSHLNKHMRVHTGEKPFTCTQCGKSFINSSSLNQHMRIHTGEKPFTCTQCGK 325

Human   412 TFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLT 476
            .|::.|:|.:|.||||.||.:.|.:|||:|::.|....|..||||.||:.|.:|||.|.:.|.|.
Zfish   326 RFSRSSSLKKHMRIHTREKTFICTQCGKSFSQSSFFNLHMIIHTGEKPFPCSQCGKSFIRSSSLN 390

Human   477 SHKRIHTGE-KPYKCKECGKAFYQSSILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTG 540
            .|..||||| ||:.|.:|||.|..||.|::|.|:||||||:.|.:|||:|:..|.|.:|.|:|||
Zfish   391 LHMMIHTGEKKPFTCTQCGKRFIHSSSLNQHMRMHTEEKPFTCTQCGKSFDCSSHLNKHMRVHTG 455

Human   541 EKRYKCKECGKGFYQSSIHSKYKRIYTGE 569
            ||.:.|.:|||.|.|||..:|:.||:|.|
Zfish   456 EKPFTCSQCGKSFSQSSSLNKHMRIHTRE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF678NP_848644.2 KRAB 43..83 CDD:460171
COG5048 138..536 CDD:227381 195/407 (48%)
C2H2 Zn finger 154..174 CDD:275368 7/19 (37%)
C2H2 Zn finger 182..202 CDD:275368 9/19 (47%)
C2H2 Zn finger 210..230 CDD:275368 8/19 (42%)
C2H2 Zn finger 238..258 CDD:275368 7/19 (37%)
C2H2 Zn finger 266..286 CDD:275368 9/19 (47%)
C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
C2H2 Zn finger 322..342 CDD:275368 7/19 (37%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
C2H2 Zn finger 378..398 CDD:275368 9/19 (47%)
C2H2 Zn finger 406..426 CDD:275368 8/19 (42%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 462..482 CDD:275368 8/19 (42%)
C2H2 Zn finger 490..510 CDD:275368 10/19 (53%)
C2H2 Zn finger 518..538 CDD:275368 9/19 (47%)
zf-H2C2_2 530..555 CDD:463886 13/24 (54%)
LOC101885920XP_021331366.2 COG5048 62..477 CDD:227381 209/414 (50%)
C2H2 Zn finger 68..88 CDD:275368 7/19 (37%)
C2H2 Zn finger 96..116 CDD:275368 9/19 (47%)
C2H2 Zn finger 124..144 CDD:275368 8/19 (42%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 9/19 (47%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 8/19 (42%)
C2H2 Zn finger 292..312 CDD:275368 9/19 (47%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 7/19 (37%)
C2H2 Zn finger 376..396 CDD:275368 8/19 (42%)
C2H2 Zn finger 405..425 CDD:275368 10/19 (53%)
C2H2 Zn finger 433..453 CDD:275368 9/19 (47%)
C2H2 Zn finger 461..481 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.

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