DRSC/TRiP Functional Genomics Resources

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Protein Alignment LUBEL and AT3G45470

DIOPT Version :10

Sequence 1:NP_723214.2 Gene:LUBEL / 33950 FlyBaseID:FBgn0031857 Length:2892 Species:Drosophila melanogaster
Sequence 2:NP_190133.1 Gene:AT3G45470 / 823687 AraportID:AT3G45470 Length:222 Species:Arabidopsis thaliana


Alignment Length:246 Identity:65/246 - (26%)
Similarity:101/246 - (41%) Gaps:46/246 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  2509 MLQQECELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQH 2573
            |..:.|.:|:.....::|..|.||||:.|..|......|::.:.::..|                
plant     1 MKGETCVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPTC---------------- 49

  Fly  2574 EDEHLEYFSNLDIFLKS---ILDNDVHELFQRKLRDRSLLQDPNFK--WC--IQCS-----SGFF 2626
                |:|...|.:.|::   :|...|.||::..:::.|:   |..|  :|  |.||     :...
plant    50 ----LDYECKLKLSLENCFKVLKPKVIELWKHMMKEESI---PLAKRIYCPYINCSTLMSKTEIS 107

  Fly  2627 ARPKQKRLICPDCGSVTCAQCRKPWERQHEGSSCEAYLEWKRENDPELQAQGVQEHLA--QNGID 2689
            ...|.....|..|..:.|..|:.||   |...||..|.  |...||.|....: :.||  |....
plant   108 RSNKSNDRACIKCSGLVCIDCKVPW---HSDLSCAEYK--KLHPDPVLDDLTL-KLLANDQKWRQ 166

  Fly  2690 CPKCKFRYSLARGGCMHFTCTQCKFEFCYGCARPFMMGAKCTVSTYCAKLG 2740
            |.||:....|.: ||.|.|| :|.::|||.|...:..| :.|..|.|.:.|
plant   167 CVKCRHLIELNQ-GCNHMTC-RCGYQFCYKCGVEWKKG-QVTCPTGCPRTG 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LUBELNP_723214.2 Bbox1_HOIP 89..132 CDD:380873
Activator_LAG-3 <326..451 CDD:151935
ZnF_RBZ 737..761 CDD:197784
RanBP2-type Zn finger 738..757 CDD:275376
HOIP-UBA 1036..1184 CDD:465229
PRK12323 <1291..>1402 CDD:481241
rne <1482..1771 CDD:236766
Not5 <1647..>2001 CDD:444384
DUF5585 <2138..>2378 CDD:465521
DamX <2154..>2254 CDD:442497
mRING-HC-C4C4_RBR_HOIP 2512..2565 CDD:438293 12/52 (23%)
BRcat_RBR_HOIP 2595..2671 CDD:438998 22/84 (26%)
Rcat_RBR_HOIP 2672..2756 CDD:439012 24/71 (34%)
E3_UbLigase_RBR 2760..2858 CDD:436265
AT3G45470NP_190133.1 BRcat_RBR_unk 87..141 CDD:439033 15/56 (27%)
Rcat_RBR_unk 163..199 CDD:439035 14/37 (38%)
Blue background indicates that the domain is not in the aligned region.

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