Sequence 1: | NP_723214.2 | Gene: | LUBEL / 33950 | FlyBaseID: | FBgn0031857 | Length: | 2892 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102338.2 | Gene: | Rnf31 / 364386 | RGDID: | 1305513 | Length: | 1062 | Species: | Rattus norvegicus |
Alignment Length: | 945 | Identity: | 247/945 - (26%) |
---|---|---|---|
Similarity: | 382/945 - (40%) | Gaps: | 219/945 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 2139 PTNQETDTIAHTEVVSSTGTRLETELPNPAMESILPSQ---------SVQEDI-----------K 2183
Fly 2184 VEAIPIQSAP---------------------------PIAD-------------SETRP-AEQPV 2207
Fly 2208 ELVLEIPSEVEPTPVEEPTALP----ITPAPPIVDSESRPVEPPVETVLEEPKKV------TP-- 2260
Fly 2261 -SMKGKTANSGTASKGP-------STSSSTKTNKS-----TVSKIPKPTNEPTNKSNS------- 2305
Fly 2306 TPLNKKVPLRSKS-------------FSAPMGISSV--------------KRIQEVYLQKQSSSI 2343
Fly 2344 ATSRVPL--------KSSPVTKKSINDAISRFNSNQADGPSTSGAAAA----------------- 2383
Fly 2384 ----AAAALLKPRSQPRIPKKKYHETCFSDDDYETS------ATEEEQEEPNLAEPQKAEQLKRK 2438
Fly 2439 MSMP--------------VFRAYPSVQEPVIE--------------------DPAILARKYVDQE 2469
Fly 2470 LVTNIAEAQIAATLVS---MKFSEDVALWAARECSDLDQAIAMLQQECELCMNSYPMNQMVSMLK 2531
Fly 2532 CLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDV 2596
Fly 2597 HELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGSSCE 2661
Fly 2662 AYLEWKRENDPELQAQGVQEHLAQNGIDCPKCKFRYSLARGGCMHFTCTQCKFEFCYGCARPFMM 2726
Fly 2727 GAKCTVSTYCAKLGLHAHHPRNCLFYLRDKIPLQLQFLLKEQNVKFDTEPMQIKDESSSSSKARA 2791
Fly 2792 QARCPIPLQKETPQGLVDTVCNTEVPDKHAGMCRTHYVEYLAGKVAKAGIDPLPIFDLTDCVQEL 2856
Fly 2857 RRRGIALPERGPWDTDEI--YKNMCSEVIKKHIPL 2889 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LUBEL | NP_723214.2 | Bbox1_HOIP | 89..132 | CDD:380873 | |
Med15 | <336..>483 | CDD:312941 | |||
ZnF_RBZ | 737..761 | CDD:197784 | |||
RanBP2-type Zn finger | 738..757 | CDD:275376 | |||
HOIP-UBA | 1036..1184 | CDD:406963 | |||
PRK01741 | 1199..>1402 | CDD:234977 | |||
rne | <1482..1771 | CDD:236766 | |||
Streccoc_I_II | <2159..>2307 | CDD:411384 | 44/240 (18%) | ||
RING-HC_RNF169 | 2513..2563 | CDD:319465 | 15/49 (31%) | ||
IBR | 2598..2660 | CDD:214763 | 26/61 (43%) | ||
IBR | <2690..2724 | CDD:396187 | 24/33 (73%) | ||
E3_UbLigase_RBR | 2760..2858 | CDD:407926 | 31/97 (32%) | ||
Rnf31 | NP_001102338.2 | PUB | 51..152 | CDD:301591 | 4/17 (24%) |
RanBP2-type Zn finger | 300..319 | CDD:275376 | 5/18 (28%) | ||
RanBP2-type Zn finger | 348..367 | CDD:275376 | 3/18 (17%) | ||
RanBP2-type Zn finger | 407..426 | CDD:275376 | 2/18 (11%) | ||
HOIP-UBA | 473..617 | CDD:293283 | 23/151 (15%) | ||
PdxA | <523..>594 | CDD:294567 | 12/77 (16%) | ||
UBA_RNF31 | 561..615 | CDD:270510 | 10/53 (19%) | ||
NMD3 | 689..>739 | CDD:282790 | 15/49 (31%) | ||
IBR | 769..831 | CDD:214763 | 26/61 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349189 | |
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4846 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1812 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0006359 | |
OrthoInspector | 1 | 1.000 | - | - | oto97212 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106001 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16004 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X6141 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.700 |