DRSC/TRiP Functional Genomics Resources

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Protein Alignment LUBEL and Y57A10A.31

DIOPT Version :9

Sequence 1:NP_723214.2 Gene:LUBEL / 33950 FlyBaseID:FBgn0031857 Length:2892 Species:Drosophila melanogaster
Sequence 2:NP_496609.2 Gene:Y57A10A.31 / 174872 WormBaseID:WBGene00013270 Length:1180 Species:Caenorhabditis elegans


Alignment Length:535 Identity:106/535 - (19%)
Similarity:170/535 - (31%) Gaps:163/535 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  2399 KKKYHETCFSDDDYETSATEEEQEEPNLAE----PQKAEQLKRKMSMPVFRAYPSVQEPV---IE 2456
            ::|||.....|...|..:...:..|..|.|    .||..::.....:|.|  :|.:.:.|   :.
 Worm   675 QRKYHVLLDVDKYREVISVLGDDSEEVLKELETYSQKKSEILVASRIPCF--FPHLNDRVRCELL 737

  Fly  2457 DPAIL--------ARK-YVDQEL----VTNIAEA-----QIAATLVSMKFSEDVALWAARECSDL 2503
            .|.|:        |:| |:|:|.    .....||     ::..||.:..|..:.   ..||..::
 Worm   738 SPGIVEKIRRQLGAQKLYMDRESQCLDFQGSLEAYEKLIELLETLSNEVFKRET---RNREAEEI 799

  Fly  2504 DQAIAMLQQECELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSIN-DCSCPFC----- 2562
            ...:      |.:|.....::.....|:|.|..|:.|..:....:|.::..| .|....|     
 Worm   800 PNLV------CPICTAETGISNDFYRLECGHVMCRTCINTQIRSRIDEQQFNIRCEIDGCHRVLT 858

  Fly  2563 ---------------------KLPELSNEAQ----HEDEHLEYFSNLD---IFLKSILDNDVHEL 2599
                                 ||..|::.|:    ..:|.|....:.|   |..||         
 Worm   859 PAEIMNIILGGSDRMKELDTQKLRRLTDRAKQLLIQTNEDLAACPSADCVGILSKS--------- 914

  Fly  2600 FQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGSSCEAYL 2664
                  |..|:.:  ||.|..|...:                     |||.....|...:||   
 Worm   915 ------DDGLISE--FKKCEACDRSY---------------------CRKCLAEPHPDDTCE--- 947

  Fly  2665 EWKRENDPELQAQGVQEHLAQNGIDCPKCKFRYSLARGGCMHFTCTQCKFEFCYGCARPFMMGAK 2729
            |:.|...||......|:.:......||||..... .|.||.|..| .|...:|:.|    :..|:
 Worm   948 EFARIRRPEDSIARYQKDMGSRVKKCPKCAVLVE-KREGCNHMQC-GCGTHYCWTC----LYVAE 1006

  Fly  2730 CTVSTYCAKLGLHAHHPRNC-LFYLRDKIP-LQLQFLLKEQNVKFDTEPM-----QIKDESSSSS 2787
            .:...|......|..|.... :..|.|..| :|...|.:.:..:.:.:||     ...|:..|.:
 Worm  1007 SSGDCYRHMQAEHGGHGGEIDMNQLPDNEPGIQQAMLQQYRAPRAEDDPMFFDEHGFTDDDDSDA 1071

  Fly  2788 KARAQARC---------------------------------PIPLQ--KETPQGLVDTVCNTEVP 2817
            .|..:|..                                 |.|.|  ::.||.|:||. .|...
 Worm  1072 DADDEAFVAAIYPQQHANRDQFANYRRNAAAFEEPPAPPPPPPPPQYIRDLPQLLIDTF-PTIYG 1135

  Fly  2818 DKHAGMCRTHYVEYL 2832
            |...   |..||:::
 Worm  1136 DPET---RVDYVDFV 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LUBELNP_723214.2 Bbox1_HOIP 89..132 CDD:380873
Med15 <336..>483 CDD:312941
ZnF_RBZ 737..761 CDD:197784
RanBP2-type Zn finger 738..757 CDD:275376
HOIP-UBA 1036..1184 CDD:406963
PRK01741 1199..>1402 CDD:234977
rne <1482..1771 CDD:236766
Streccoc_I_II <2159..>2307 CDD:411384
RING-HC_RNF169 2513..2563 CDD:319465 11/76 (14%)
IBR 2598..2660 CDD:214763 10/61 (16%)
IBR <2690..2724 CDD:396187 12/33 (36%)
E3_UbLigase_RBR 2760..2858 CDD:407926 21/113 (19%)
Y57A10A.31NP_496609.2 RING_Ubox 803..>832 CDD:388418 7/34 (21%)
IBR 882..946 CDD:214763 18/101 (18%)
IBR <970..1011 CDD:388632 13/46 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1812
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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