DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11322 and gcna

DIOPT Version :9

Sequence 1:NP_609071.2 Gene:CG11322 / 33949 FlyBaseID:FBgn0031856 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001013591.1 Gene:gcna / 541448 ZFINID:ZDB-GENE-050320-153 Length:586 Species:Danio rerio


Alignment Length:550 Identity:121/550 - (22%)
Similarity:200/550 - (36%) Gaps:148/550 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SDSSSQSEGDGEEDS--NDADDEEYQQPEWTGRKRPPLVYLELGDKIIIVRNEPQPNVKLEDDVQ 100
            ||:||..|...:|:.  ..:|||:::  ::...|..|....:..........||.|.:..|.|  
Zfish    61 SDNSSGKENRSQEEHILLTSDDEDFE--KFLASKATPKSTFKQSASSAQKPREPVPVLSSESD-- 121

  Fly   101 LKTKMHKFLGLIPSRRKLYNPAVVYDMKPEDIENINCVVNSSHASAEPFTPSAEQPI---RPKTM 162
              .:...||..:.:.:....|   ..|...| |::...:..|.:|.:.|....:..|   :.||:
Zfish   122 --NEFELFLNRVKTPKAKVQP---QSMSSSD-ESLKHFIVDSMSSDDDFVTEKKPSIYKGKAKTV 180

  Fly   163 MT---------------------------------STWSKLNLSNIDEPTPEESQAKSKNDFE-- 192
            .|                                 |||.    :....|..:|.||.||:..|  
Zfish   181 KTPKSVQKTKKPAPSLCNSPVFLSDSDDDCNIVIKSTWR----TRHSRPPSDEHQATSKDREETE 241

  Fly   193 ----------LWSIAFSFDQCTPDLHKEPIDLID--------------LPNEEQL---------A 224
                      :.|.....|.|:.:  :|...|:|              :|:.|..         :
Zfish   242 KPRVPQPTITVKSHTSRDDTCSSE--EEFQSLLDRVRQNLGGRTSASPMPSAEPKPQRPCLSTPS 304

  Fly   225 ANCRRHKSSVPCLERHPKFYGFVRSLSPSISLNMCH--PLALTYRQ------------------- 268
            |..|:..|.|| ::..|..:..|:.: ||....:.|  |.||...:                   
Zfish   305 ATGRKTGSQVP-VKDSPVIHTPVQQM-PSSRPVLSHTEPRALPNSRVVVCKTPGCFLQSLSAPGS 367

  Fly   269 ---NNFKICKVALAKVLFNIFNHAIFHCGLQV--PIVWKHAMHTRCTCQLTVDAH----GKRRAK 324
               .:||..|..|...|:.::|.::|...|.|  .:.|.:.|  |.|....:...    |||.|:
Zfish   368 VYCRSFKQNKDELTSKLYQLYNTSVFDSQLPVDMSVTWNNKM--RKTAGYCISGQERGTGKRYAR 430

  Fly   325 ILLLRSIKTTAELIR-CLLHEMCHVAAFVFN--RELGHGDNCRRWAYQAKMALPEAPTIEDNCID 386
            |.|...:..:|:.:| .|:|||||.|.::.|  |: |||...|.:|.:|.:|.||.|.: ..|..
Zfish   431 IELSVKVCDSADRLRDTLIHEMCHAATWLINNVRD-GHGPFWRLYARKAMLAHPELPMV-SRCHS 493

  Fly   387 -----SFKYTCTMCTRCSYGVADLSMQNLR--CYYCQFEVSVKNVWKSEMYDWTRSDP-TMTPFK 443
                 .|:|.|..| :.:.|....|:...:  |..|          ..::...|.|.| ..|||.
Zfish   494 YDINYKFQYQCNRC-KNTIGRHSKSLDTTKFVCALC----------TGQLVLLTPSKPRAPTPFA 547

  Fly   444 CFIWDRYLQLGEQ-GANTHSTNMALLNEEF 472
            .|:.:.|....:: ...:|:..|..|:.:|
Zfish   548 TFVKENYGSTKQELTGQSHAEIMRKLSADF 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11322NP_609071.2 DUF45 278..422 CDD:302795 46/159 (29%)
gcnaNP_001013591.1 SprT-like 384..535 CDD:287265 45/165 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586189
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23099
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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