DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment meng and grp

DIOPT Version :9

Sequence 1:NP_001285688.1 Gene:meng / 33948 FlyBaseID:FBgn0031855 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster


Alignment Length:351 Identity:84/351 - (23%)
Similarity:143/351 - (40%) Gaps:60/351 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 FADQYNIEKTLAEGCFAKILLCRHRPTNTLVVLKAV----HAELTTIKEFQKEFHYNYELSHHHH 157
            |.:.:.:.:||.||.:.::.|..:|.|...|.:|.|    |.:  .....:||.... ::....|
  Fly    18 FVEGWTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPD--AANSVRKEVCIQ-KMLQDKH 79

  Fly   158 ILSAYAVAFQTMDYYVFAMEHAPYGDLASNIGPN-GLHENACKLISEQLSSALGFMHSKNLVHRD 221
            ||..:....|....|:| :|:|..|:|...|.|: |:.::..:....||.|.|.::|.:.:.|||
  Fly    80 ILRFFGKRSQGSVEYIF-LEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRD 143

  Fly   222 LKIENILVFTPDFTRVKLCDFGATT------KKGLLVHKVKHTWTSC-----VPPEQLELIKNER 275
            ||.||:|:...|  .||:.|||..|      |:.||..:       |     |.||.|:    :.
  Fly   144 LKPENLLLDEHD--NVKISDFGMATMFRCKGKERLLDKR-------CGTLPYVAPEVLQ----KA 195

  Fly   276 FQCLPVSDSWQFGILLYNILTGNPPWQSADWVKDQSYAN---FMKYEQRKTTKVPDNFRRFSPRL 337
            :...| :|.|..|::|..:|.|..||       ||...|   |..:......::...:.:.....
  Fly   196 YHAQP-ADLWSCGVILVTMLAGELPW-------DQPSTNCTEFTNWRDNDHWQLQTPWSKLDTLA 252

  Fly   338 MRCFRKYLSHDPEDRCKITEVAKYMKDRWVECRISTSKSATLISPTNHDQDSCIYLNQREGRLSG 402
            :...||.|:..|..|..:   .|.:..:|...:.:             |.:....|......|..
  Fly   253 ISLLRKLLATSPGTRLTL---EKTLDHKWCNMQFA-------------DNERSYDLVDSAAALEI 301

  Fly   403 DENKLRFKRMMSTYGLDIPIDQAMVR 428
            ...|.:.:|:.|:..|...:|.::.|
  Fly   302 CSPKAKRQRLQSSAHLSNGLDDSISR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mengNP_001285688.1 STKc_SBK1 107..366 CDD:270889 72/277 (26%)
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 73/286 (26%)
S_TKc 22..278 CDD:214567 73/283 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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