DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TTLL3B and Ttll2

DIOPT Version :9

Sequence 1:NP_609068.2 Gene:TTLL3B / 33946 FlyBaseID:FBgn0031853 Length:756 Species:Drosophila melanogaster
Sequence 2:XP_006227981.1 Gene:Ttll2 / 292311 RGDID:1305200 Length:541 Species:Rattus norvegicus


Alignment Length:559 Identity:126/559 - (22%)
Similarity:218/559 - (38%) Gaps:140/559 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 DLCAEV---RPFRNRVRRSQFLDFSTKVGLVGCAEQERWYR-EDGVCGMSYPRFYRLGGNNLEER 275
            |:.||:   .|..|.|::.|.|....:.  .|.|.:...:| ::...|:........|.:..:|:
  Rat    10 DVTAEIFRLSPEGNTVQKRQRLRMEDEA--PGAALKPLVFRVDESTPGVVQSVLLERGWDKFDEQ 72

  Fly   276 MAFIED---YQQTQARSLLLYVR-------EHQPAELISENGTIFSTTLDFALGKVKKMVRHAEH 330
            ...:||   |.::.:..:..||.       .|.|       ||...|..|.       :.:|..|
  Rat    73 CQDVEDWNLYWRSSSFRMAEYVNIKPWQRLNHHP-------GTTSLTRKDC-------LAKHLAH 123

  Fly   331 Y-SLDDARIKPPTPAEIVENQTFMVQSTDVLKSNAKFKVSEKVMAEYARLAGLYLDQIESL--RP 392
            . .|....|...||.      ||::.|                  :|.:....|..:.:.|  :|
  Rat   124 MRRLYGESIYEFTPL------TFIMPS------------------DYTKFVAKYFKEKQDLGTKP 164

  Fly   393 DYRWDGSRNLWILKPGYQSRGIGIVIRSSLDDILQWTSNNQNKKYIVQKYIERPLLIYRTKFDIR 457
            .|        ||.||...|:|.||:|.|.:.|::      ....|:|||||..|||:.|.|.|:|
  Rat   165 SY--------WICKPAKLSQGRGIIIFSDIRDLM------FKDAYVVQKYICNPLLVGRYKCDLR 215

  Fly   458 QYMLLTITDTK-VSIWTYRDCYLRFSSQEFTMDDLRESI-HLTNNSVQKRYKNKTNRDSRLPKNN 520
            .|  :.:|..| ::|:.|::..:||::::|.:.:|.:.. ||||:|:.|...:.......:.:..
  Rat   216 IY--VCVTGFKPLTIYMYQEGLVRFATEKFDLSNLEDYYSHLTNSSINKLGASYEKIKEVVGQGC 278

  Fly   521 MWSLDQFKNYLRIMGAPDGSWSKTYNGFKQNLVAVVMASLDETELLQNAFELYGCDFMLDEHYNP 585
            .|:|.:|.:|||.....|....:..|   ..::..|:|......:..|.|||:|.|.::|::..|
  Rat   279 KWTLSRFFSYLRNWDVDDLLLRRKIN---HMVILTVLAMAPSVPVANNCFELFGFDILIDDNLKP 340

  Fly   586 ILIEINSTPDLS--PSTEITARICPMVLKDCIRVVVDLPKNPTAATGLFELAFEVNYSINKGADG 648
            .|:|:|.:|.||  .||:::      |.:..:..:::|                           
  Rat   341 WLLEVNYSPALSLECSTDVS------VKRSLVHDIIEL--------------------------- 372

  Fly   649 KPLELNGKQMTLFENMPRMRNSPRTRLLRKILNNVKTSTTKK-VEKVVEAPAKNVKNPTAKITKK 712
              |.|||.:            |...:..|....|...|..:: .:|:..|||            .
  Rat   373 --LYLNGLR------------SEEKKCGRTSQGNAMVSQARRSQQKLCAAPA------------P 411

  Fly   713 KKLSASAGSSTAASAQPSTQNLTTKLILNPATRENLALQ 751
            ...::....:|.:...|:.|::..|.......||.|..|
  Rat   412 PSYASLIQFATCSKRSPAAQHMCPKHTRTSQLREMLCRQ 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TTLL3BNP_609068.2 TTL 325..626 CDD:281171 81/307 (26%)
Ttll2XP_006227981.1 TTL 98..371 CDD:281171 86/335 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2157
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.