DRSC/TRiP Functional Genomics Resources

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Protein Alignment homer and HOMER1

DIOPT Version :9

Sequence 1:NP_001036341.2 Gene:homer / 33944 FlyBaseID:FBgn0025777 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_004263.1 Gene:HOMER1 / 9456 HGNCID:17512 Length:354 Species:Homo sapiens


Alignment Length:416 Identity:158/416 - (37%)
Similarity:220/416 - (52%) Gaps:90/416 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTITPNM 65
            |||||||:.:||||.|||.||:.|:..|..||.||:||||:||:|||||::|:||:|||||||||
Human     1 MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNM 65

  Fly    66 TFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEATKNAMKSANGSNAVTPTTSAN 130
            |||:||||||||:|.||||||||||:||..|:||.|||||.|||.:.|.:.:.....:|.|.|..
Human    66 TFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKSQEKMELTSTPSQE 130

  Fly   131 TSPISGRAVGSMQNDNTAIDPHTVEPPNMSNTNTQNANPDSPSHKLLNTSDVKADIGSATPSPQP 195
            :      |.|.:|:..|        |.:::.|:.:            .|.||..   ::.|..:|
Human   131 S------AGGDLQSPLT--------PESINGTDDE------------RTPDVTQ---NSEPRAEP 166

  Fly   196 TSGVTGGGGVTISSGGSIVGMHTGPGAGATAEQQLKYENERLKMALAQSCANAKKWEIELATLKN 260
            |...                                       :..:.|.|.:|.||.||||||.
Human   167 TQNA---------------------------------------LPFSHSSAISKHWEAELATLKG 192

  Fly   261 NNIRLTSALQESTANVDEWKRQLHTYKEENIRL-KRDMEQLCVGGGVVAAAGGGATEDELRREV- 323
            ||.:||:||.||||||.:||:||..|:||..|| ||..|..||.....|.   ...:.||.:.: 
Human   193 NNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECVSSQANAV---HTHKTELNQTIQ 254

  Fly   324 ---ATLKARTEQLQKELMQQEL----ELKSANISLREK------SNDQTLAKLSEVNGVFAKHLS 375
               .|||.:.|::::  ::||:    ||:....||.:|      .|.....:||::.....|..:
Human   255 ELEETLKLKEEEIER--LKQEIDNARELQEQRDSLTQKLQEVEIRNKDLEGQLSDLEQRLEKSQN 317

  Fly   376 ELYGVQKDMESLIQI--AKCTXDTEL 399
            |....:.::::|::|  .|....|||
Human   318 EQEAFRNNLKTLLEILDGKIFELTEL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
homerNP_001036341.2 EVH1_Homer_Vesl 3..111 CDD:269917 78/107 (73%)
HOMER1NP_004263.1 EVH1_Homer_Vesl 3..111 CDD:269917 78/107 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..173 15/126 (12%)
SMC_N <157..>352 CDD:330553 65/234 (28%)
Required for tetramerization. /evidence=ECO:0000250|UniProtKB:Q9Z214 290..354 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I3963
eggNOG 1 0.900 - - E1_28ISB
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 246 1.000 Inparanoid score I3280
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251658at2759
OrthoFinder 1 1.000 - - FOG0004784
OrthoInspector 1 1.000 - - otm42043
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10918
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7014
SonicParanoid 1 1.000 - - X1808
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.960

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