DRSC/TRiP Functional Genomics Resources

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Protein Alignment homer and HOMER2

DIOPT Version :9

Sequence 1:NP_001036341.2 Gene:homer / 33944 FlyBaseID:FBgn0025777 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_006720838.1 Gene:HOMER2 / 9455 HGNCID:17513 Length:364 Species:Homo sapiens


Alignment Length:393 Identity:166/393 - (42%)
Similarity:213/393 - (54%) Gaps:102/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTITPNMTF 67
            ||||||.:||||.|||.||:.|:.||.:||.||:|||.:||.||||||:|.|.:|||||||||||
Human    13 EQPIFTTRAHVFQIDPNTKKNWMPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTF 77

  Fly    68 TQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEATKNAMKSANGSNAVTPTTSANTS 132
            |:||||||||:|.|||||:||||:||.:||||.|||||||||.    |.|.........||:|.|
Human    78 TKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAA----KIAKDKTQEKIETSSNHS 138

  Fly   133 PISGRAVGSMQNDNTAIDPHTVEPPNMSNTNTQNANPDSPSHKLLNTSDVKADIGSATPSPQPTS 197
            ..|||                 |.|  |:|...:.|         .|.|.||.            
Human   139 QESGR-----------------ETP--SSTQASSVN---------GTDDEKAS------------ 163

  Fly   198 GVTGGGGVTISSGGSIVGMHTGPGAGATAEQQLKYENERLKMALAQSCANAKKWEIELATLKNNN 262
                               |.||     |...||.||::||:||.||.||.|||||||.||:.:|
Human   164 -------------------HAGP-----ANTHLKSENDKLKIALTQSAANVKKWEIELQTLRESN 204

  Fly   263 IRLTSALQESTANVDEWKRQLHTYKEENIRLKR---DMEQLCVGGGVVAAAGGGATEDELRREV- 323
            .|||:|||||.|:|::||||....::||.||:.   ::|:.|               .|:.||. 
Human   205 ARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQC---------------SEINREKE 254

  Fly   324 --ATLKARTEQLQKELMQQELELKSANISLREKSN--DQTLAKLSEVNGVFAKHLSELYGVQKDM 384
              ..||.|.|:|:.||.::|.|||    .||::|.  .|.:::...|:       .:|...::|.
Human   255 KNTQLKRRIEELEAELREKETELK----DLRKQSEIIPQLMSECEYVS-------EKLEAAERDN 308

  Fly   385 ESL 387
            ::|
Human   309 QNL 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
homerNP_001036341.2 EVH1_Homer_Vesl 3..111 CDD:269917 80/107 (75%)
HOMER2XP_006720838.1 EVH1_Homer_Vesl 13..121 CDD:269917 80/111 (72%)
SMC_N <103..343 CDD:330553 100/303 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160349
Domainoid 1 1.000 163 1.000 Domainoid score I3963
eggNOG 1 0.900 - - E1_28ISB
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3560
Inparanoid 1 1.050 246 1.000 Inparanoid score I3280
Isobase 1 0.950 - 0 Normalized mean entropy S3324
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251658at2759
OrthoFinder 1 1.000 - - FOG0004784
OrthoInspector 1 1.000 - - otm42043
orthoMCL 1 0.900 - - OOG6_106337
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7014
SonicParanoid 1 1.000 - - X1808
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.640

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