DRSC/TRiP Functional Genomics Resources

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Protein Alignment homer and HOMER3

DIOPT Version :9

Sequence 1:NP_001036341.2 Gene:homer / 33944 FlyBaseID:FBgn0025777 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001139194.1 Gene:HOMER3 / 9454 HGNCID:17514 Length:361 Species:Homo sapiens


Alignment Length:425 Identity:152/425 - (35%)
Similarity:212/425 - (49%) Gaps:107/425 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTITPNMTF 67
            |||||:.:||||.|||.|||.||.|...|:.||:|||::||:|||||:.|.||:||||:||||||
Human     6 EQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATRNVYRIISIGGAKAIINSTVTPNMTF 70

  Fly    68 TQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEATKNAM-KSANGSNAVTPTTSANT 131
            |:||||||||:|.|||||||||||||..||:|.|||||||||.:.|. ||.:|...        |
Human    71 TKTSQKFGQWADSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLAREKSQDGGEL--------T 127

  Fly   132 SPISGRAVGSMQNDNTAIDPHTVEPPNMSNTNTQNANPDSPSHKLLNTSDVKADIGSATPSPQPT 196
            ||..|.|            .|.|.|..:.:.|       .|..:.|..|. .||      :|.||
Human   128 SPALGLA------------SHQVPPSPLVSAN-------GPGEEKLFRSQ-SAD------APGPT 166

  Fly   197 SGVTGGGGVTISSGGSIVGMHTGPGAGATAEQQLKYENERLKMALAQSCANAKKWEIELATLKNN 261
                                                |.||||..|::......:||.|...|:::
Human   167 ------------------------------------ERERLKKMLSEGSVGEVQWEAEFFALQDS 195

  Fly   262 NIRLTSALQESTANVDEWKRQLHTYKEENIRLKRDMEQL-------CVGGGVVAAAGGGATEDEL 319
            |.:|..||:|:.|...:|::||...:.|..||::.:.:|       ....|.....|.|.:.::|
Human   196 NNKLAGALREANAAAAQWRQQLEAQRAEAERLRQRVAELEAQAASEVTPTGEKEGLGQGQSLEQL 260

  Fly   320 R-------REVATLKART-------EQLQKELMQ---QELELKSANI---------SLREKSNDQ 358
            .       :|:.|||::|       |..::|..|   |:||.::|.:         ||.|...::
Human   261 EALVQTKDQEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAER 325

  Fly   359 TLAKLSEVNGVFAKHLS-ELYGVQKDMESLIQIAK 392
            ..|: :|| |..|:.|. .|:.:.:..|.|.::|:
Human   326 ERAR-AEV-GRAAQLLDVSLFELSELREGLARLAE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
homerNP_001036341.2 EVH1_Homer_Vesl 3..111 CDD:269917 79/107 (74%)
HOMER3NP_001139194.1 Required for interaction with NFATC2. /evidence=ECO:0000269|PubMed:18218901 1..80 51/73 (70%)
EVH1_Homer_Vesl 6..114 CDD:269917 79/107 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..169 22/124 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I3963
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 246 1.000 Inparanoid score I3280
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251658at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42043
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1808
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
99.030

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