DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment homer and homer2

DIOPT Version :9

Sequence 1:NP_001036341.2 Gene:homer / 33944 FlyBaseID:FBgn0025777 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001018470.1 Gene:homer2 / 553661 ZFINID:ZDB-GENE-050522-417 Length:314 Species:Danio rerio


Alignment Length:383 Identity:140/383 - (36%)
Similarity:196/383 - (51%) Gaps:85/383 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGEQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTITPNM 65
            ||||||||.:||||.|||.||:.|:.||.:||.||:||||:||.||||||:|||.:|||||||||
Zfish     1 MGEQPIFTTRAHVFQIDPTTKKNWVPASKQAVTVSYFYDSARNSYRIISVDGTKVIINSTITPNM 65

  Fly    66 TFTQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEATKNAMKSANGSNAVTPTTSAN 130
            .||:||||||||:|.|||||:|||||||.:|:||.|||.|||||.|.|.:.:...    ..||::
Zfish    66 NFTKTSQKFGQWADSRANTVFGLGFASEQQLSKFAEKFLEVKEAAKLAREKSQDK----METSSD 126

  Fly   131 TSPISGRAVGSMQNDNTAIDPHTVEPPNMSNTNTQNANPDSPSHKLLNTSDVKADIGSATPSPQP 195
            .|..|||..           |...:|.:::.|:.:..:...|     .|:.:||:..:.:...|.
Zfish   127 QSQESGRDT-----------PSGNQPSSINGTDDEKISHSGP-----ETAALKAESSAESRKTQA 175

  Fly   196 TSGVTGGGGVTISSGGSIVGMHTGPGAGATAEQQLKYENERLKMALAQSCANAKKWEIELATLKN 260
            |..:.                                ||.:|:..:|:.....|    ||:..:.
Zfish   176 TRSLE--------------------------------ENNQLRSKIAELELQCK----ELSVERE 204

  Fly   261 NNIRLTSALQESTANVDEWKRQLHTYKEENIR--------LKRDMEQLCVGGGVVAAAGGGATED 317
            .|.:||..:||..|::.:.:::|     ||:|        |..:.|.|   .|.:.||       
Zfish   205 RNAQLTVRIQELEADLQDKQQEL-----ENLRKQAEIIPQLMAECESL---SGKLQAA------- 254

  Fly   318 ELRREVATLKARTEQLQKEL---MQQELELKSANISLREKSNDQTLAKLSEVNGVFAK 372
            ||  ..:.|:.|.|.||.|.   .||:..||: .:.|..:..|..:.:|.||....:|
Zfish   255 EL--SSSGLRERVELLQGEAQHRQQQQNSLKT-ELKLLMEQLDGKIDELHEVRQGISK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
homerNP_001036341.2 EVH1_Homer_Vesl 3..111 CDD:269917 80/107 (75%)
homer2NP_001018470.1 EVH1_Homer_Vesl 3..111 CDD:269917 80/107 (75%)
GrpE 180..>235 CDD:295646 17/95 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3560
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251658at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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