DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment homer and homer1b

DIOPT Version :9

Sequence 1:NP_001036341.2 Gene:homer / 33944 FlyBaseID:FBgn0025777 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001002496.3 Gene:homer1b / 436769 ZFINID:ZDB-GENE-040801-44 Length:398 Species:Danio rerio


Alignment Length:434 Identity:148/434 - (34%)
Similarity:212/434 - (48%) Gaps:124/434 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EQPIFTCQAHVFHIDPKTKRTWITASMKAVNVSFFYDSSRNLYRIISVEGTKAVINSTITPNMTF 67
            ||||::.:||||.|||.||:.|:..|..||.||:||||:||:|||||::|:||:|||||||||:|
Zfish    41 EQPIYSTRAHVFQIDPSTKKNWMPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMSF 105

  Fly    68 TQTSQKFGQWSDVRANTVYGLGFASEAELTKFVEKFQEVKEATKNAMKS---------------- 116
            |:||||||||:|.||||||||||:||..|.||.:||.|.|||.:.|.:.                
Zfish   106 TKTSQKFGQWADSRANTVYGLGFSSEHHLAKFADKFAEYKEAARIAKEKSLEKMELASSPSQESP 170

  Fly   117 ANGSNAVTPTTSANTSPISGRAVGSMQNDNTAIDPHTVEPPNMSNTNTQNANPDSPSHKLLNTSD 181
            |:..:.:||..:|:...|:|..     :|.|..|   |.|.:|                      
Zfish   171 ADIHSPLTPPVTADLCRINGTG-----DDVTLSD---VSPNSM---------------------- 205

  Fly   182 VKADIGSATPSPQPTSGVTGGGGVTISSGGSIVGMHTGPGAGATAEQQLKYENERLKMALAQSCA 246
            :::|:...||:                                                ||.|..
Zfish   206 LQSDLSPTTPT------------------------------------------------LAHSPT 222

  Fly   247 NAKKWEIELATLKNNNIRLTSALQESTANVDEWKRQLHTYKEENIRLKRDMEQLCVGGGVVAAAG 311
            ..|.||.|||.||:||.:||:||.||||||.:||:||..|:||..||.:.:.:|...........
Zfish   223 TNKHWEAELAALKSNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVSELESQSSQTNVIK 287

  Fly   312 GGATE-----DELRREVATLKARTEQLQKELMQQELELKSANISLREKSNDQTLAKLSEV---NG 368
            ...||     :||.   .||:|:.|::.:  :::|:|    |....:...|:...||.:.   |.
Zfish   288 SQKTELNQTIEELE---CTLRAKEEEMMR--LKEEVE----NAKQLQAQKDELTKKLEDTDMRNK 343

  Fly   369 VFAKHLSEL-----------YGVQKDMESLIQI--AKCTXDTEL 399
            ...:.||:|           ..::|::::|::|  .|.. .|||
Zfish   344 ELEEQLSDLEQRLESSQVDQENLRKNLKTLLEILDGKIFELTEL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
homerNP_001036341.2 EVH1_Homer_Vesl 3..111 CDD:269917 74/107 (69%)
homer1bNP_001002496.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 155 1.000 Domainoid score I4175
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 205 1.000 Inparanoid score I3699
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1251658at2759
OrthoFinder 1 1.000 - - FOG0004784
OrthoInspector 1 1.000 - - otm26302
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1808
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.070

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