DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aatf and Aatf

DIOPT Version :9

Sequence 1:NP_609066.1 Gene:Aatf / 33943 FlyBaseID:FBgn0031851 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_062790.1 Gene:Aatf / 56321 MGIID:1929608 Length:526 Species:Mus musculus


Alignment Length:546 Identity:169/546 - (30%)
Similarity:261/546 - (47%) Gaps:102/546 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PQTVAEKVSKLL-AHPNESDSAEDSDFDVATGPRLVD-FEEEEYDLPDARSTDFRKRNVKLLSEQ 71
            ||.:|.::.:|| ..|.|:|  .::|.:.||..|::| |:|.|.:..|...:..||.....|.:.
Mouse     4 PQPLALQLEQLLNPRPREAD--PEADPEEATRARVIDRFDEGEEEKDDLAVSSIRKLAPVSLLDT 66

  Fly    72 SDRYKGKISSRKELDDDEDKDDEQEVSYEESDEDDENLTNFKQKLNAGGAEDSEEETAAGHSESG 136
            ..||.||.:|||..     |:|..|.:...|.:::.:        :.||:||.:.| ..|..|. 
Mouse    67 DKRYSGKTTSRKAW-----KEDHWEQALPSSSDNEAS--------DEGGSEDGDSE-GLGLEEI- 116

  Fly   137 EESEEIESNLTDFKKKFEAGDFKYDDDEEEDDDSE-------EEDHSQESEGDD--DDSEDDEAE 192
              ||:::.:|.|.|...|.|        .||.|||       .||..::.||:|  |..||..:|
Mouse   117 --SEDVDEDLEDNKISDEGG--------SEDGDSEGLGLEEFSEDVEEDLEGEDEEDREEDRNSE 171

  Fly   193 DDAIKPSDVMSKTNHQAEIQKGLAVQNQLRIWERLLELRINTQKFTSKANQLPAPETLTKLASE- 256
            ||.:..:  .|......|::||.||:||:.:|::|||.||..||.....||||.|:.......: 
Mouse   172 DDGVVAA--FSSVKVSEEVEKGRAVKNQIALWDQLLEGRIKLQKALLTTNQLPQPDVFPVFKDKG 234

  Fly   257 SDELQSVLNEAQERSSKLLQQLLSLQSALHQQYSEMKKSVKRKQPTEDS---------------- 305
            ..|..|.|..:.:....||:.|:.||..|..||.:.:..|...:|..:|                
Mouse   235 GPEFASALKNSHKALKALLRSLVDLQEELLFQYPDTRHIVNGAKPNTESEEISSEDDELVGEKKK 299

  Fly   306 ---GPAVKK-----FGSVLQSNFQQMIGYRNEVLLKWDDRTKL----LTPGAGVKRKSLQEDYDI 358
               .|..:|     :.|.:...|.....|||..|.||.|:|||    |..|.|...:|      |
Mouse   300 QRKAPPKRKLEMEDYPSFMAKRFADFTIYRNHTLQKWHDKTKLASGKLGKGFGAFERS------I 358

  Fly   359 IKKIGSALANREALVEKSQTPKNSQAEQQENTPVQRL-------------------------KHI 398
            :.:|...:.::|.|:.::||.:::.....:..||...                         :.|
Mouse   359 LTQIDHIMMDKERLLRRTQTKRSAYRVLGKPEPVPEPVAETLPGEPETLPQGPANAHLRDLDEEI 423

  Fly   399 YDDSDFYHQQLRELIEYKASTSSNMSEIT--KQFVELQKLRQKMKKKVDTRASKGRKLRYVVHNK 461
            :||.|||||.||||||.|.|:.....::.  :|::.:||||.|::||||.:||||||||:.|.:|
Mouse   424 FDDDDFYHQLLRELIERKTSSLDPNDQVAMGRQWLAIQKLRSKIRKKVDRKASKGRKLRFHVLSK 488

  Fly   462 LINFMAPNESSDWTDASKSELYKSLF 487
            |::||||.:.:..:|.:::||::|||
Mouse   489 LLSFMAPIDHTAMSDDARTELFRSLF 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AatfNP_609066.1 AATF-Che1 211..337 CDD:290078 43/150 (29%)
TRAUB 405..487 CDD:285388 40/83 (48%)
AatfNP_062790.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 13..51 14/39 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..175 33/118 (28%)
AATF-Che1 188..339 CDD:290078 52/179 (29%)
Binds POLR2J. /evidence=ECO:0000250 240..282 11/42 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..307 10/56 (18%)
Binds RB1. /evidence=ECO:0000250 283..338 20/82 (24%)
Binds RB1 and SP1. /evidence=ECO:0000250 339..438 33/125 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..410 13/46 (28%)
TRAUB 430..514 CDD:285388 29/53 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8368
eggNOG 1 0.900 - - E1_KOG2773
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3658
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54578
OrthoDB 1 1.010 - - D428754at33208
OrthoFinder 1 1.000 - - FOG0005185
OrthoInspector 1 1.000 - - oto92688
orthoMCL 1 0.900 - - OOG6_102684
Panther 1 1.100 - - LDO PTHR15565
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R139
SonicParanoid 1 1.000 - - X4800
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.870

Return to query results.
Submit another query.